Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C11
(440 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 225 1e-59
03_01_0547 + 4093196-4093657,4094267-4095148 225 1e-59
03_01_0544 + 4082528-4082989,4083585-4084466 225 1e-59
03_01_0543 + 4076981-4077442,4078145-4079026 225 1e-59
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 52 3e-07
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 51 5e-07
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 51 5e-07
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 51 5e-07
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 40 7e-04
02_04_0462 + 23131433-23132836 37 0.006
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 33 0.13
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 29 1.3
05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152 29 1.7
11_06_0516 + 24502645-24504507 29 2.2
10_08_1038 - 22485394-22485960,22486712-22487197 28 2.9
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 28 2.9
11_06_0596 + 25385744-25388890 28 3.8
06_03_1311 - 29241884-29242054,29242802-29242879,29242968-292430... 28 3.8
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 28 3.8
11_04_0242 - 15273774-15274043,15274131-15274235 27 5.1
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 27 5.1
04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 27 5.1
11_03_0079 + 9669666-9669728,9670779-9672545 27 6.7
03_05_0010 + 19622430-19622512,19622539-19623082,19623361-196237... 27 6.7
08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420 27 8.8
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136... 27 8.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 225 bits (550), Expect = 1e-59
Identities = 98/144 (68%), Positives = 123/144 (85%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK+
Sbjct: 260 LKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKD 319
Query: 189 NPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNP 368
+P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E P
Sbjct: 320 DPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEP 379
Query: 369 KSIKSGDAAIVNLVPSKPLCVESF 440
K +K+GDA +V ++P+KP+ VE+F
Sbjct: 380 KFLKNGDAGMVKMIPTKPMVVETF 403
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 225 bits (550), Expect = 1e-59
Identities = 98/144 (68%), Positives = 123/144 (85%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK+
Sbjct: 260 LKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKD 319
Query: 189 NPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNP 368
+P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E P
Sbjct: 320 DPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEP 379
Query: 369 KSIKSGDAAIVNLVPSKPLCVESF 440
K +K+GDA +V ++P+KP+ VE+F
Sbjct: 380 KFLKNGDAGMVKMIPTKPMVVETF 403
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 225 bits (550), Expect = 1e-59
Identities = 98/144 (68%), Positives = 123/144 (85%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK+
Sbjct: 260 LKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKD 319
Query: 189 NPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNP 368
+P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E P
Sbjct: 320 DPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEP 379
Query: 369 KSIKSGDAAIVNLVPSKPLCVESF 440
K +K+GDA +V ++P+KP+ VE+F
Sbjct: 380 KFLKNGDAGMVKMIPTKPMVVETF 403
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 225 bits (550), Expect = 1e-59
Identities = 98/144 (68%), Positives = 123/144 (85%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK+
Sbjct: 260 LKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKD 319
Query: 189 NPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNP 368
+P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E P
Sbjct: 320 DPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEP 379
Query: 369 KSIKSGDAAIVNLVPSKPLCVESF 440
K +K+GDA +V ++P+KP+ VE+F
Sbjct: 380 KFLKNGDAGMVKMIPTKPMVVETF 403
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 51.6 bits (118), Expect = 3e-07
Identities = 31/153 (20%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
++ G ++ P +V + + ++ A P +NV + + +++ G+V S
Sbjct: 252 IREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVL-SSIG 310
Query: 189 NPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTED 362
NP +F AQ+ +L + GY VL H+ C+ ++ E++D + K +
Sbjct: 311 NPVGAVTEFNAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVDLIEEIDMKKKKEADP 370
Query: 363 NPKS-------IKSGDAAIVNLVPSKPLCVESF 440
K +K+G + + + +C+E+F
Sbjct: 371 KKKKPKRKPLFVKNGAVVVCRIQVNNLICIENF 403
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 50.8 bits (116), Expect = 5e-07
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
++ G+ V+ +P VKS+E + A GDNV +++ + +L + G
Sbjct: 507 IRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKL----ILGGILC 562
Query: 189 NP--PRGAADF-TAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTE 359
NP P ++F +V+VL+ I GY H A + +I +D + GK ++
Sbjct: 563 NPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLD-KAGKPSK 621
Query: 360 DNPKSIKSGDAAIVNLVPSKPLCVESF 440
P+ +KS A+V + P+CV+ F
Sbjct: 622 TAPRFLKSKQNAVVQVTLDAPVCVQEF 648
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 50.8 bits (116), Expect = 5e-07
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
++ G+ V+ +P VKS+E + A GDNV +++ + +L + G
Sbjct: 507 IRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKL----ILGGILC 562
Query: 189 NP--PRGAADF-TAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTE 359
NP P ++F +V+VL+ I GY H A + +I +D + GK ++
Sbjct: 563 NPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLD-KAGKPSK 621
Query: 360 DNPKSIKSGDAAIVNLVPSKPLCVESF 440
P+ +KS A+V + P+CV+ F
Sbjct: 622 TAPRFLKSKQNAVVQVTLDAPVCVQEF 648
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 50.8 bits (116), Expect = 5e-07
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
+ G ++ P +V SV + ++ A PG+NV + + ++ G+V K
Sbjct: 207 ISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK- 265
Query: 189 NPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTED 362
NP ++F AQ+ +L + GY VL H+ C+ E+ E++D + K +
Sbjct: 266 NPVSAISEFRAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELIEEIDLKRRKEGDI 325
Query: 363 NPKSIK 380
K K
Sbjct: 326 KKKKSK 331
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 40.3 bits (90), Expect = 7e-04
Identities = 30/143 (20%), Positives = 64/143 (44%)
Frame = +3
Query: 12 KPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 191
+ G+ ++ P VK++E + + A GDNV ++ + + G V +
Sbjct: 492 RSGSKILVMPFGELAVVKTIERNSSSCNLARAGDNVAIGLQGIDPSHIMPGGVICHP-DY 550
Query: 192 PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPK 371
P A+ +++VL+ I G ++ +I ++++TGK+++ P+
Sbjct: 551 PVSVASCLELKILVLDITVPILVGL---------QVSASMVKILSLLEQKTGKASKKIPR 601
Query: 372 SIKSGDAAIVNLVPSKPLCVESF 440
+ S A++ + K +CVE F
Sbjct: 602 FLTSRQTAVIEVKLEKEVCVEEF 624
>02_04_0462 + 23131433-23132836
Length = 467
Score = 37.1 bits (82), Expect = 0.006
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +3
Query: 60 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 239
V VEM + + +A+ GDNVG ++ + ++ RG V + P D V+ +
Sbjct: 324 VTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKD 383
Query: 240 HPGQIS---NGYTPVLDCHTAHIACKFAEIKEKVD 335
G+ S GY P T + +I D
Sbjct: 384 EGGRHSPFFPGYRPQFYMRTTDVTGNVTKIMNDKD 418
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 32.7 bits (71), Expect = 0.13
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Frame = +3
Query: 48 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQV 227
+ T V VEM + L GDNVG ++ + +++RG V K + F A++
Sbjct: 311 LKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEI 368
Query: 228 IVL------NHPGQISNGYTPVLDCHTAHIACK 308
VL H +SN Y+P TA + K
Sbjct: 369 YVLTKDEGGRHTAFLSN-YSPQFYFRTADVTGK 400
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 6 RLKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDS- 182
++ P T+V +P T KSVE +E L A G ++G + + + G+
Sbjct: 259 KVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIGNKIGQGGFGAVYYAELRGEKA 318
Query: 183 --KNNPPRGAADFTAQVIVLNH 242
K + +F A++ VL H
Sbjct: 319 AIKKMDMQATHEFLAELKVLTH 340
>05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152
Length = 265
Score = 29.1 bits (62), Expect = 1.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 391 PPLSTWFPPSPCVW 432
PP+S+ PPSPC W
Sbjct: 175 PPISSGMPPSPCEW 188
>11_06_0516 + 24502645-24504507
Length = 620
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +3
Query: 69 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 248
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 249 QISNG 263
+I G
Sbjct: 170 EIRRG 174
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 218 SASHCAKS--PRSNIKRIHTCIGLPHSPHSL 304
S+S CA + P NI RIH IGL SP L
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIGLARSPAHL 126
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -2
Query: 391 ASPDLMDLGLSSVDLPVRRSTFSL 320
A+ DLM G+S V+LPVRR+ F++
Sbjct: 580 ATLDLMYSGISMVNLPVRRNHFAV 603
>11_06_0596 + 25385744-25388890
Length = 1048
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 316 KSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSP 438
K+ K +N+ TTL L++ M P+S+W + +P
Sbjct: 832 KANLKDLFAQINKLHTTLRSLSIRMKPVSSWGSTEAVLMTP 872
>06_03_1311 -
29241884-29242054,29242802-29242879,29242968-29243049,
29243141-29243212,29243316-29243437,29243541-29243596,
29244264-29244333,29244435-29244518,29244599-29244667,
29244855-29244928,29245014-29245125,29245220-29245510
Length = 426
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 313 PKSKRKSTVVLVNQQRTTLNPLNLVMP 393
P+ R+S + Q TT++P NLV+P
Sbjct: 103 PRRNRRSPALRAAFQETTISPANLVLP 129
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 226 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 83
+ + A P G + RR L D+FL LK L PG+ + S
Sbjct: 274 SASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTS 321
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 312 QICRLCGLCGNPIQVCI 262
QIC +C CG P VCI
Sbjct: 74 QICAVCTCCGGPHGVCI 90
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 440 EGLHTQGLGGNQVDNGGITRFNGF 369
EG + GGN +DN G+T +N F
Sbjct: 371 EGCSSITEGGNSMDNSGVTEYNLF 394
>04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888
Length = 748
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 156 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGY 266
RRG +++ PR +A + QV+ HP +S GY
Sbjct: 175 RRGSNCVENRRRKPRSSAQSSPQVVTPRHP--VSEGY 209
>11_03_0079 + 9669666-9669728,9670779-9672545
Length = 609
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 213 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 335
FTA+ +H Q++N VLDC AH+ CK+ + E ++
Sbjct: 572 FTAENRSKSH--QVNN-VLAVLDCLQAHMECKYDMLTESLE 609
>03_05_0010 +
19622430-19622512,19622539-19623082,19623361-19623767,
19623831-19624167,19624290-19624508,19625522-19625826,
19626128-19626287,19626422-19626547
Length = 726
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 318 IKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPS 416
IKE + R GKST D P +G I PS
Sbjct: 207 IKEAITTRGGKSTRDPPYPNPTGTNGIAREAPS 239
>08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420
Length = 647
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 213 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 335
FTA+ +H Q++N +LDC AH+ CK+ + E ++
Sbjct: 610 FTAENRSKSH--QVNN-VLAILDCLQAHMECKYDMLTESLE 647
>02_01_0202 +
1366149-1366594,1368444-1368444,1368616-1368743,
1368943-1369039
Length = 223
Score = 26.6 bits (56), Expect = 8.8
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 108 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVL 278
GD+ G V RR V GD + P + DF V++L H S+GY +L
Sbjct: 20 GDSGGGEAPAAEVLRRRRVPVPGDGLSPIPMFSVDFRLFVLILPH----SHGYLVLL 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,665,330
Number of Sequences: 37544
Number of extensions: 301817
Number of successful extensions: 877
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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