Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C11
(440 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 282 1e-78
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 276 9e-77
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 235 1e-64
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 119 1e-29
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.85
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 3.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 3.4
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 4.5
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 6.0
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 6.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 7.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 7.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.9
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 7.9
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 282 bits (691), Expect = 1e-78
Identities = 130/144 (90%), Positives = 137/144 (95%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
LKPG VV FAPA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 272 LKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 331
Query: 189 NPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNP 368
NPP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE+NP
Sbjct: 332 NPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENP 391
Query: 369 KSIKSGDAAIVNLVPSKPLCVESF 440
KSIKSGDAAIV LVPSKP+C E+F
Sbjct: 392 KSIKSGDAAIVMLVPSKPMCAEAF 415
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 276 bits (676), Expect = 9e-77
Identities = 127/144 (88%), Positives = 136/144 (94%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
LKPG +V FAPA +TTEVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKN 331
Query: 189 NPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNP 368
PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NP
Sbjct: 332 QPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENP 391
Query: 369 KSIKSGDAAIVNLVPSKPLCVESF 440
KSIKSGDAAIV L P+KP+CVE+F
Sbjct: 392 KSIKSGDAAIVMLQPTKPMCVEAF 415
Score = 21.4 bits (43), Expect = 4.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 115 LSPGTASCRASWCISTDLTSVVMLAGAKTTTVPG 14
L PG A ++T++ SV M A T +PG
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 235 bits (576), Expect = 1e-64
Identities = 109/119 (91%), Positives = 114/119 (95%)
Frame = +3
Query: 63 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 242
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 243 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 419
PGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 119 bits (287), Expect = 1e-29
Identities = 56/60 (93%), Positives = 57/60 (95%)
Frame = +3
Query: 9 LKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 188
LKPG VV FAPA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 215 LKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 0.85
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 185 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 295
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 3.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 141 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 248
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
Score = 20.6 bits (41), Expect = 7.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 434 LHTQGLGGNQVDNGGITRFNGFRVV 360
LHT L N++ G FNG V+
Sbjct: 385 LHTLELSDNKLRTVGAQLFNGLFVL 409
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 3.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 328 KSTVVLVNQQRTTLNPLNLVM 390
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 4.5
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +1
Query: 112 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 234
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.0 bits (42), Expect = 6.0
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 363 NPKSIKSGDAAIVNLVPSKPLC 428
NP+ G +V L PS P C
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC 87
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.0 bits (42), Expect = 6.0
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 363 NPKSIKSGDAAIVNLVPSKPLC 428
NP+ G +V L PS P C
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC 88
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 328 KSTVVLVNQQRTTLNPLNLVM 390
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 328 KSTVVLVNQQRTTLNPLNLVM 390
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 7.9
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 200 GSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESR 334
G LHSA S SN+ + T + P +Q + ++S+
Sbjct: 938 GHSVLHSAQSVVASSASNVTNVTTNLTTILPPVKVQSQQQSQQSQ 982
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 7.9
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 188 QPTQGSCRLHSASHCAKSPRS 250
Q TQ LH S A+SP S
Sbjct: 665 QHTQSQLHLHLTSPPARSPSS 685
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,955
Number of Sequences: 438
Number of extensions: 2910
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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