Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C08
(269 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 79 1e-14
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 55 3e-07
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 55 4e-07
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 44 5e-04
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 42 0.004
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 40 0.008
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 37 0.076
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 36 0.23
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 35 0.31
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 33 0.94
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 33 1.2
UniRef50_Q3EB00 Cluster: Uncharacterized protein At3g26180.2; n=... 32 2.9
UniRef50_Q7SHK6 Cluster: Predicted protein; n=1; Neurospora cras... 31 5.0
UniRef50_Q0LIN4 Cluster: HNH nuclease; n=1; Herpetosiphon aurant... 31 6.6
UniRef50_Q8SWJ8 Cluster: Putative uncharacterized protein ECU01_... 31 6.6
UniRef50_UPI0000D575D2 Cluster: PREDICTED: similar to CG13868-PA... 30 8.8
UniRef50_Q6YPV4 Cluster: ATP-dependent DNA helicase; n=2; Candid... 30 8.8
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 79.4 bits (187), Expect = 1e-14
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = +1
Query: 121 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKCAKY*PHSAGRYA 267
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEK AKY PHSAGRYA
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYA 57
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +1
Query: 52 MAEENWTEEVADAGGMVVDNMPLPQPADIPEIKLFGRWSCYDVQVSDMSLQDYIS 216
M+E + + V + P+ QPA++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 54.8 bits (126), Expect = 4e-07
Identities = 27/43 (62%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = +1
Query: 142 EIKLFGRWSCYDVQVSDMSLQDYIS-VKEKCAKY*PHSAGRYA 267
E+KLF RWS DVQ+SD+SL DYI V K A Y PH+AGRY+
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYS 50
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 44.4 bits (100), Expect = 5e-04
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 115 PLPQPADIP-EIKLFGRWSCYDVQVSDMSLQDYISVKEKCAKY*PHSAGRYA 267
PL + IP EIK+ GRWS DV+V D SL+ YI+++ + PH+ GR+A
Sbjct: 7 PLQERFFIPHEIKVMGRWSTEDVEVKDPSLKPYINLEPRLL---PHTHGRHA 55
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 41.5 bits (93), Expect = 0.004
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +1
Query: 142 EIKLFGRWSCYDVQVSDMSLQDYISVKEKCAKY*PHSAGRYA 267
E+K+FG+W +V+V D L+DYI +K Y PH+ GR+A
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLK---PMYLPHTGGRHA 50
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 40.3 bits (90), Expect = 0.008
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 142 EIKLFGRWSCYDVQVSDMSLQDYISVKEKCAKY*PHSAGRY 264
++K+F RW V+++D+S+ +YI +K + PHS+G Y
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNY 59
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 37.1 bits (82), Expect = 0.076
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +1
Query: 142 EIKLFGRWSCYDVQVSDMSLQDYISVKEKCAKY*PHSAGR 261
EIKLFG+W V V D SL+ +IS+ PH+AGR
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVLI---PHTAGR 44
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 35.5 bits (78), Expect = 0.23
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +1
Query: 145 IKLFGRWSCYDVQVSDMSLQDYISVKEKCAKY*PHSAGRY 264
I LFG+WS DV V D L+ YI +K PH+ GRY
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVIL---PHTEGRY 75
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 35.1 bits (77), Expect = 0.31
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 148 KLFGRWSCYDVQVSDMSLQDYISVKEKCAKY*PHSAGRYA 267
K+FG+W +V+V D+ ++ Y+S+ PHS+G++A
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVIV---PHSSGKHA 42
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 33.5 bits (73), Expect = 0.94
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 145 IKLFGRWSCYDVQVSDMSLQDYISVKEKCAKY*PHSAGRY 264
IKLF ++ V+V D+SL DYI++ + PH+AGR+
Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRF 55
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 52 MAEENWTEEVADAGG-MVVDNMPLPQPADIPEIKLFGRWSCYDVQVSDMSLQDY 210
+AEENW + +ADAGG M M + +D+ E+ L W + ++ LQD+
Sbjct: 208 VAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCL---WGAGRGNIGEIELQDH 258
>UniRef50_Q3EB00 Cluster: Uncharacterized protein At3g26180.2; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g26180.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 368
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 237 FCTLLFYRNIILQRHVRYLNVITTPSPKKFD-FGNISRLW*WHVVHNHAARVGDFFGPVL 61
FC + I + +++L PSP KF GN+ ++ + H + + +GPV+
Sbjct: 8 FCLITLASLIFFAKKIKHLKWNLPPSPPKFPVIGNLHQI--GELPHRSLQHLAERYGPVM 65
Query: 60 LSH 52
L H
Sbjct: 66 LLH 68
>UniRef50_Q7SHK6 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 1652
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 73 EEVADAGGMVVDNMPLPQPADIPEIKLFGR 162
E A++GG V + +P P+PA P++K R
Sbjct: 715 EAQAESGGKVAETLPPPEPAPAPKVKQASR 744
>UniRef50_Q0LIN4 Cluster: HNH nuclease; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: HNH nuclease - Herpetosiphon
aurantiacus ATCC 23779
Length = 227
Score = 30.7 bits (66), Expect = 6.6
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +2
Query: 41 KCEIWLRRTGPKKSPTRAAWLWTTCHYHSRLIFPKSNFLGDGVVMTFKYRT 193
KC+ W R K TR L T CH SR+ KS+ G V TFK T
Sbjct: 36 KCKSWQPREWFNKDHTRGDGLSTRCHACSRVKVRKSH---KGRVSTFKGHT 83
>UniRef50_Q8SWJ8 Cluster: Putative uncharacterized protein
ECU01_1070; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU01_1070 - Encephalitozoon
cuniculi
Length = 399
Score = 30.7 bits (66), Expect = 6.6
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +1
Query: 4 RGREVIIRKLRIKV*NMAEENWTEEVADAGGMVVDNMPLPQPADIPEIKLFGRWSCYDVQ 183
RGR RK R++ N E+W+E +G D+ P+ P C
Sbjct: 295 RGRRS--RKARLR--NRESEDWSEREESSGSWRADH---DGPSPRPRSSRSPGMPCTREM 347
Query: 184 VSDMSLQDYISVKEKCAKY 240
+DM D ++ E+CAKY
Sbjct: 348 CADMDRYDSPAIGEECAKY 366
>UniRef50_UPI0000D575D2 Cluster: PREDICTED: similar to CG13868-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG13868-PA - Tribolium castaneum
Length = 438
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 141 RNQTFWAMELL*RSSIGHVFAGLYFGKREVCKILTTF 251
RN + LL R GH+ AG+YF +E C T F
Sbjct: 324 RNLVYNFRSLLARDQKGHLIAGVYFKVKENCDEFTIF 360
>UniRef50_Q6YPV4 Cluster: ATP-dependent DNA helicase; n=2;
Candidatus Phytoplasma asteris|Rep: ATP-dependent DNA
helicase - Onion yellows phytoplasma
Length = 747
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 246 WSIFCTLLFYRNIILQRHVRYLNVITTPSPKKFDFGNI 133
+ +F + FY++ +++ + YLNVI PS + FDF I
Sbjct: 390 YQVFGGISFYQSKVVKDFLAYLNVIANPS-QDFDFKRI 426
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,196,171
Number of Sequences: 1657284
Number of extensions: 5166543
Number of successful extensions: 13568
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 13344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13567
length of database: 575,637,011
effective HSP length: 67
effective length of database: 464,598,983
effective search space used: 10221177626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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