Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C08
(269 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68751-1|CAA92971.1| 210|Caenorhabditis elegans Hypothetical pr... 67 2e-12
U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical pr... 30 0.26
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 0.79
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 28 0.79
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 28 0.79
Z92827-4|CAB07323.1| 722|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 26 3.2
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 26 3.2
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 25 5.6
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 25 5.6
AF036694-8|AAB88346.2| 607|Caenorhabditis elegans Hypothetical ... 25 5.6
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 25 7.3
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 25 7.3
Z81481-7|CAB63437.3| 511|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z67738-2|CAA91546.2| 482|Caenorhabditis elegans Hypothetical pr... 25 9.7
>Z68751-1|CAA92971.1| 210|Caenorhabditis elegans Hypothetical
protein T05E11.1 protein.
Length = 210
Score = 66.9 bits (156), Expect = 2e-12
Identities = 35/68 (51%), Positives = 42/68 (61%)
Frame = +1
Query: 61 ENWTEEVADAGGMVVDNMPLPQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKCAKY 240
+NW E +V D P + PE+ LFG+WS V VSD+SL DYI VKEK AKY
Sbjct: 3 DNWGSE-----NVVADAAPA---TEAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKY 54
Query: 241 *PHSAGRY 264
PHSAGR+
Sbjct: 55 LPHSAGRF 62
>U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical
protein F55G1.6 protein.
Length = 350
Score = 29.9 bits (64), Expect = 0.26
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 146 SNFLGDGVVMTFKYRTCLCRIIF 214
SN+L DG V+ +K + C CR +F
Sbjct: 124 SNYLEDGDVLGYKLKPCFCRKLF 146
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 0.79
Identities = 7/24 (29%), Positives = 18/24 (75%)
Frame = +1
Query: 160 RWSCYDVQVSDMSLQDYISVKEKC 231
R CY V++ +++ ++Y++ K++C
Sbjct: 1115 REDCYTVKIEELTAEEYVAFKKRC 1138
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +1
Query: 121 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKC 231
P P++ E+K C D+ V +M +++++ K++C
Sbjct: 1489 PPPSETEEMK------CKDINVEEMDAEEFVAYKKRC 1519
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 166 SCYDVQVSDMSLQDYISVKEKCAK 237
SC DV+V ++S +Y K +C K
Sbjct: 1784 SCDDVKVEELSRIEYAKYKSRCVK 1807
Score = 26.2 bits (55), Expect = 3.2
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 166 SCYDVQVSDMSLQDYISVKEKCAK 237
+C DV+V +++ +Y K+KC +
Sbjct: 1540 NCRDVKVEELTADEYAEYKKKCLR 1563
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 160 RWSCYDVQVSDMSLQDYISVKEKC 231
++SCYD V M+ ++Y ++KC
Sbjct: 1874 KFSCYDQDVDRMTDEEYSEFEKKC 1897
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 157 GRWSCYDVQVSDMSLQDYISVKEKCAK 237
G C D+ V+ +S +Y K+KC K
Sbjct: 38 GTDDCDDISVNSLSDSEYEEYKKKCGK 64
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 160 RWSCYDVQVSDMSLQDYISVKEKCAK 237
R C DV + MS ++Y + K++C K
Sbjct: 1202 RPDCDDVDTNKMSEEEYRAYKKRCGK 1227
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 160 RWSCYDVQVSDMSLQDYISVKEKCAKY*P 246
R C DV + +S ++Y + K++C K P
Sbjct: 1399 RHDCDDVDTNKLSEEEYRAYKKRCGKRRP 1427
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 163 WSCYDVQVSDMSLQDYISVKEKCAK 237
+ C D +V M+ Q+Y ++KC K
Sbjct: 1749 FECKDAKVERMNAQEYEEYRKKCKK 1773
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 0.79
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 62 RTGPKKSPTRAAWLWTTCHYHS 127
+T P K +R W+ T C +HS
Sbjct: 254 KTTPSKKSSRVPWVCTVCEFHS 275
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 0.79
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 62 RTGPKKSPTRAAWLWTTCHYHS 127
+T P K +R W+ T C +HS
Sbjct: 254 KTTPSKKSSRVPWVCTVCEFHS 275
>Z92827-4|CAB07323.1| 722|Caenorhabditis elegans Hypothetical
protein C29F7.5 protein.
Length = 722
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -3
Query: 138 NISRLW*WHVVHNHAARVGDFFGPVLLSHISHF 40
+ S W WH+ H DFFG S S F
Sbjct: 42 SFSGFWHWHLTMQHCNNENDFFGSFNSSSNSPF 74
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 81 DFFGPVLLSHISHFYSQFTNYNL 13
DF P L ++ H YSQF N+++
Sbjct: 245 DFLEPDTLKNLVHKYSQFINFDI 267
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 234 CTLLFYRNIILQRHVR-YLNVITTPSPKKFDFGNISRLW*WHVVHNHAARVGDFFGPVLL 58
C + + N ++ ++ YLN T P+ + + + W + N A + + FG +
Sbjct: 56 CDPMIFMNFPKKKQLKLYLNFRTIVCPENAEISKLGNSFAWEIKFNSAGFLKNCFGKIST 115
Query: 57 SHISHFYS 34
S +S
Sbjct: 116 PPFSILFS 123
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 234 CTLLFYRNIILQRHVR-YLNVITTPSPKKFDFGNISRLW*WHVVHNHAARVGDFFGPVLL 58
C + + N ++ ++ YLN T P+ + + + W + N A + + FG +
Sbjct: 56 CDPMIFMNFPKKKQLKLYLNFRTIVCPENAEISKLGNSFAWEIKFNSAGFLKNCFGKIST 115
Query: 57 SHISHFYS 34
S +S
Sbjct: 116 PPFSILFS 123
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 74 KKSPTRAAWLWTTCHYHSRLIFPKSNFLGDGVVM 175
K T A+ +T HS +PKS LG+ V+
Sbjct: 38 KNHKTIEAYQYTHTFIHSAYYYPKSKSLGENAVV 71
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 92 AAWLWTTCHYHS 127
+A LWT+CHY+S
Sbjct: 966 SAALWTSCHYYS 977
>AF036694-8|AAB88346.2| 607|Caenorhabditis elegans Hypothetical
protein CD4.8 protein.
Length = 607
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 103 VDNMPLPQPADIPEIKLFGRWSCYDVQVSDMSLQDYISV 219
VD P P+PAD +L R S Y++ + D S Q+Y V
Sbjct: 342 VDGYPKPEPADFDFEELLNRDSTYNLLI-DHS-QEYKEV 378
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 268 ERTCQQNVVNILHTSLLP 215
E TC Q V +H SLLP
Sbjct: 3691 EETCPQEVATQIHDSLLP 3708
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 268 ERTCQQNVVNILHTSLLP 215
E TC Q V +H SLLP
Sbjct: 3691 EETCPQEVATQIHDSLLP 3708
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 268 ERTCQQNVVNILHTSLLP 215
E TC Q V +H SLLP
Sbjct: 3691 EETCPQEVATQIHDSLLP 3708
>Z81481-7|CAB63437.3| 511|Caenorhabditis elegans Hypothetical
protein C38D9.6 protein.
Length = 511
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 145 IKLFGRWSCYDVQVSDMSLQDYISVKEKCAK 237
I+ F R+S +DV + +S D + ++EK K
Sbjct: 422 IENFFRFSRFDVSLKSLSKLDAVLIREKLLK 452
>Z67738-2|CAA91546.2| 482|Caenorhabditis elegans Hypothetical
protein W03G11.3 protein.
Length = 482
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 103 VDNMPLPQPADIPEIKLFGRWSCYDV 180
+DN PLP D + +F W Y V
Sbjct: 25 LDNRPLPSWYDDSKFGIFCHWGLYSV 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,426,698
Number of Sequences: 27780
Number of extensions: 124641
Number of successful extensions: 317
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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