Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_C06
         (296 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    23   2.4  
AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding pr...    23   2.4  
AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding pr...    23   2.4  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   2.4  
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    23   3.2  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    23   3.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           22   5.6  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    21   7.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   9.8  

>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 189 CTTNCLAPLAKVIHDNFEI 245
           C  NCL   AKV+ DN ++
Sbjct: 72  CYMNCLFHEAKVVDDNGDV 90


>AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding
           protein AgamOBP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 189 CTTNCLAPLAKVIHDNFEI 245
           C  NCL   AKV+ DN ++
Sbjct: 72  CYMNCLFHEAKVVDDNGDV 90


>AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding
           protein protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 189 CTTNCLAPLAKVIHDNFEI 245
           C  NCL   AKV+ DN ++
Sbjct: 72  CYMNCLFHEAKVVDDNGDV 90


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 198 NCLAPLAKVIHDNFEIIDGWMT 263
           NC+  +  ++     IID WMT
Sbjct: 648 NCVDDIEILVSSQIRIIDRWMT 669


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +1

Query: 58  LLLTWWVEPRK*SSPHQVLML 120
           +++T++ +  + S PHQ+LML
Sbjct: 278 IMITFYRDEPRFSQPHQLLML 298


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +1

Query: 58  LLLTWWVEPRK*SSPHQVLML 120
           +++T++ +  + S PHQ+LML
Sbjct: 278 IMITFYRDEPRFSQPHQLLML 298


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 121 GASALGAEMITFLAPP 74
           GASAL  +++T  APP
Sbjct: 683 GASALSRKLLTESAPP 698


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 176 NNFVGRIVGFQVDTNYKHGSIS 111
           N   G   G Q+DTN  HG ++
Sbjct: 249 NTVSGGQDGNQMDTNQMHGEVA 270


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 125  HGSISTWCGDDYFLGSTHQVSRSFIS 48
            H  +S WC  +  + +TH    S +S
Sbjct: 1425 HHIMSNWCYAEMTIDTTHTADGSKLS 1450


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,731
Number of Sequences: 2352
Number of extensions: 7030
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 18688617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)