Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C06
(296 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 155 4e-39
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 155 4e-39
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 155 5e-39
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 155 5e-39
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 155 5e-39
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 154 9e-39
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 154 9e-39
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 154 9e-39
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 154 9e-39
Z81040-1|CAB02781.1| 145|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 25 7.4
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 25 7.4
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 25 9.7
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 25 9.7
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 25 9.7
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 25 9.7
U41039-6|AAK68626.1| 135|Caenorhabditis elegans Synapse defecti... 25 9.7
U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defecti... 25 9.7
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 25 9.7
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 25 9.7
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 155 bits (377), Expect = 4e-39
Identities = 78/98 (79%), Positives = 85/98 (86%), Gaps = 1/98 (1%)
Frame = +3
Query: 6 RAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSY-KVISN 182
+A++VVESTGVFTT +KASAHL GGAKKVIISAPSADAPM+VVGVN E YD S VISN
Sbjct: 96 KADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVISN 155
Query: 183 ASCTTNCLAPLAKVIHDNFEIIDGWMTAVHATTATQNT 296
ASCTTNCLAPLAKVI+DNF II+G MT VHA TATQ T
Sbjct: 156 ASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKT 193
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 155 bits (377), Expect = 4e-39
Identities = 78/98 (79%), Positives = 85/98 (86%), Gaps = 1/98 (1%)
Frame = +3
Query: 6 RAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSY-KVISN 182
+A++VVESTGVFTT +KASAHL GGAKKVIISAPSADAPM+VVGVN E YD S VISN
Sbjct: 96 KADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVISN 155
Query: 183 ASCTTNCLAPLAKVIHDNFEIIDGWMTAVHATTATQNT 296
ASCTTNCLAPLAKVI+DNF II+G MT VHA TATQ T
Sbjct: 156 ASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKT 193
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 155 bits (376), Expect = 5e-39
Identities = 77/98 (78%), Positives = 85/98 (86%), Gaps = 1/98 (1%)
Frame = +3
Query: 6 RAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSY-KVISN 182
+A++VVESTGVFTT +KASAHL GGAKKVIISAPSADAPM+VVGVN E YD S V+SN
Sbjct: 96 KADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVVSN 155
Query: 183 ASCTTNCLAPLAKVIHDNFEIIDGWMTAVHATTATQNT 296
ASCTTNCLAPLAKVI+DNF II+G MT VHA TATQ T
Sbjct: 156 ASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKT 193
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 155 bits (376), Expect = 5e-39
Identities = 77/98 (78%), Positives = 85/98 (86%), Gaps = 1/98 (1%)
Frame = +3
Query: 6 RAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSY-KVISN 182
+A++VVESTGVFTT +KASAHL GGAKKVIISAPSADAPM+VVGVN E YD S V+SN
Sbjct: 96 KADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVVSN 155
Query: 183 ASCTTNCLAPLAKVIHDNFEIIDGWMTAVHATTATQNT 296
ASCTTNCLAPLAKVI+DNF II+G MT VHA TATQ T
Sbjct: 156 ASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKT 193
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 155 bits (376), Expect = 5e-39
Identities = 77/98 (78%), Positives = 85/98 (86%), Gaps = 1/98 (1%)
Frame = +3
Query: 6 RAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSY-KVISN 182
+A++VVESTGVFTT +KASAHL GGAKKVIISAPSADAPM+VVGVN E YD S V+SN
Sbjct: 96 KADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVVSN 155
Query: 183 ASCTTNCLAPLAKVIHDNFEIIDGWMTAVHATTATQNT 296
ASCTTNCLAPLAKVI+DNF II+G MT VHA TATQ T
Sbjct: 156 ASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKT 193
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 154 bits (374), Expect = 9e-39
Identities = 77/97 (79%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
Frame = +3
Query: 9 AEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD-PSYKVISNA 185
A+YVVESTGVFTT +KA+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNA
Sbjct: 97 ADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNA 156
Query: 186 SCTTNCLAPLAKVIHDNFEIIDGWMTAVHATTATQNT 296
SCTTNCLAPLAKVI+DNF II+G MT VHA TATQ T
Sbjct: 157 SCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKT 193
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 154 bits (374), Expect = 9e-39
Identities = 77/97 (79%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
Frame = +3
Query: 9 AEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD-PSYKVISNA 185
A+YVVESTGVFTT +KA+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNA
Sbjct: 97 ADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNA 156
Query: 186 SCTTNCLAPLAKVIHDNFEIIDGWMTAVHATTATQNT 296
SCTTNCLAPLAKVI+DNF II+G MT VHA TATQ T
Sbjct: 157 SCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKT 193
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 154 bits (374), Expect = 9e-39
Identities = 77/97 (79%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
Frame = +3
Query: 9 AEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD-PSYKVISNA 185
A+YVVESTGVFTT +KA+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNA
Sbjct: 97 ADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNA 156
Query: 186 SCTTNCLAPLAKVIHDNFEIIDGWMTAVHATTATQNT 296
SCTTNCLAPLAKVI+DNF II+G MT VHA TATQ T
Sbjct: 157 SCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKT 193
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 154 bits (374), Expect = 9e-39
Identities = 77/97 (79%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
Frame = +3
Query: 9 AEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD-PSYKVISNA 185
A+YVVESTGVFTT +KA+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNA
Sbjct: 97 ADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNA 156
Query: 186 SCTTNCLAPLAKVIHDNFEIIDGWMTAVHATTATQNT 296
SCTTNCLAPLAKVI+DNF II+G MT VHA TATQ T
Sbjct: 157 SCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKT 193
>Z81040-1|CAB02781.1| 145|Caenorhabditis elegans Hypothetical
protein C26E1.1 protein.
Length = 145
Score = 25.8 bits (54), Expect = 5.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 116 CSHVCSWCQP 145
CS CSWCQP
Sbjct: 8 CSFHCSWCQP 17
>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical protein
R09H10.5 protein.
Length = 1603
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 290 LGGSSGMHCSHPTVNNFKVVVDDLCEGCEAV 198
+ G + +HC PT N VVD C+ C ++
Sbjct: 1092 VNGYTSLHCEVPTCQNGGSVVDFKCQ-CPSI 1121
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -3
Query: 93 LLSWLHPPSEQKLYQWL*THRLIQQRIQPSC 1
L W+ S++++ QW+ +H+ I + SC
Sbjct: 3216 LRQWMVQDSQERMIQWMTSHK-IDMEVYASC 3245
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 122 HVCSWCQPGSLRSFLQSYFKCFLHN*LPRTPRKG 223
H +W PG R ++ Y +N +PRT G
Sbjct: 155 HGYAWVPPGLSRKKVEEYMSQLPNNVVPRTNSNG 188
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 122 HVCSWCQPGSLRSFLQSYFKCFLHN*LPRTPRKG 223
H +W PG R ++ Y +N +PRT G
Sbjct: 192 HGYAWVPPGLSRKKVEEYMSQLPNNVVPRTNSNG 225
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 122 HVCSWCQPGSLRSFLQSYFKCFLHN*LPRTPRKG 223
H +W PG R ++ Y +N +PRT G
Sbjct: 192 HGYAWVPPGLSRKKVEEYMSQLPNNVVPRTNSNG 225
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 122 HVCSWCQPGSLRSFLQSYFKCFLHN*LPRTPRKG 223
H +W PG R ++ Y +N +PRT G
Sbjct: 100 HGYAWVPPGLSRKKVEEYMSQLPNNVVPRTNSNG 133
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 122 HVCSWCQPGSLRSFLQSYFKCFLHN*LPRTPRKG 223
H +W PG R ++ Y +N +PRT G
Sbjct: 155 HGYAWVPPGLSRKKVEEYMSQLPNNVVPRTNSNG 188
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 122 HVCSWCQPGSLRSFLQSYFKCFLHN*LPRTPRKG 223
H +W PG R ++ Y +N +PRT G
Sbjct: 192 HGYAWVPPGLSRKKVEEYMSQLPNNVVPRTNSNG 225
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 122 HVCSWCQPGSLRSFLQSYFKCFLHN*LPRTPRKG 223
H +W PG R ++ Y +N +PRT G
Sbjct: 192 HGYAWVPPGLSRKKVEEYMSQLPNNVVPRTNSNG 225
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 122 HVCSWCQPGSLRSFLQSYFKCFLHN*LPRTPRKG 223
H +W PG R ++ Y +N +PRT G
Sbjct: 100 HGYAWVPPGLSRKKVEEYMSQLPNNVVPRTNSNG 133
>U41039-6|AAK68626.1| 135|Caenorhabditis elegans Synapse defective
protein 9, isoformb protein.
Length = 135
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 93 IISAPSADAPMFVVGVNLEAYDPSYKVISNASCT 194
+++AP + P VN + +VISNA CT
Sbjct: 99 LVAAPVEEKPAPEQPVNASSLHNELRVISNAICT 132
>U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defective
protein 9, isoforma protein.
Length = 357
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 93 IISAPSADAPMFVVGVNLEAYDPSYKVISNASCT 194
+++AP + P VN + +VISNA CT
Sbjct: 321 LVAAPVEEKPAPEQPVNASSLHNELRVISNAICT 354
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 93 IISAPSADAPMFVVGVNLEAYDPSYKVISNASCT 194
+++AP + P VN + +VISNA CT
Sbjct: 416 LVAAPVEEKPAPEQPVNASSLHNELRVISNAICT 449
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 122 HVCSWCQPGSLRSFLQSYFKCFLHN*LPRTPRKG 223
H +W PG R ++ Y +N +PRT G
Sbjct: 192 HGYAWVPPGLSRKKVEEYMSQLPNNVVPRTNSNG 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,656,300
Number of Sequences: 27780
Number of extensions: 151860
Number of successful extensions: 388
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -