Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_C04
         (276 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   1.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   2.4  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 70  SSGRGSARVFLCRCSGRYG 14
           +SG  +ARV  C C+G  G
Sbjct: 909 ASGGTTARVVRCVCAGSTG 927



 Score = 20.6 bits (41), Expect = 3.2
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +1

Query: 124 CWRHCAA*CCQRM 162
           CWR C    C+++
Sbjct: 885 CWRECDKATCEKL 897


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 175 AKGLAYADNTKQHNAANKNNDFILY 101
           AK L Y D   + N   +N+D  ++
Sbjct: 129 AKSLIYIDMIIKKNVTQQNSDVFIF 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,885
Number of Sequences: 336
Number of extensions: 391
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4577651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)