Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_C04
         (276 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026155-1|AAH26155.1|  411|Homo sapiens RSBN1 protein protein.        31   0.65 
AL365321-6|CAH72507.1|  754|Homo sapiens round spermatid basic p...    31   0.65 
AL137856-1|CAI19067.1|  754|Homo sapiens round spermatid basic p...    31   0.65 
AK002082-1|BAA92075.1|  754|Homo sapiens protein ( Homo sapiens ...    31   0.65 

>BC026155-1|AAH26155.1|  411|Homo sapiens RSBN1 protein protein.
          Length = 411

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 15  PYRPEHRQRKTRADPLPLEATNSTVTV 95
           P  P HR+R++R  P PL  TN+  TV
Sbjct: 60  PLAPPHRRRRSRQHPGPLPPTNAAPTV 86


>AL365321-6|CAH72507.1|  754|Homo sapiens round spermatid basic
           protein 1 protein.
          Length = 754

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 15  PYRPEHRQRKTRADPLPLEATNSTVTV 95
           P  P HR+R++R  P PL  TN+  TV
Sbjct: 60  PLAPPHRRRRSRQHPGPLPPTNAAPTV 86


>AL137856-1|CAI19067.1|  754|Homo sapiens round spermatid basic
           protein 1 protein.
          Length = 754

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 15  PYRPEHRQRKTRADPLPLEATNSTVTV 95
           P  P HR+R++R  P PL  TN+  TV
Sbjct: 60  PLAPPHRRRRSRQHPGPLPPTNAAPTV 86


>AK002082-1|BAA92075.1|  754|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11220 fis, clone PLACE1008129. ).
          Length = 754

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 15  PYRPEHRQRKTRADPLPLEATNSTVTV 95
           P  P HR+R++R  P PL  TN+  TV
Sbjct: 60  PLAPPHRRRRSRRHPGPLPPTNAAPTV 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,272,123
Number of Sequences: 237096
Number of extensions: 236566
Number of successful extensions: 700
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)