Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_C04
         (276 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   6.5  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           19   8.6  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           19   8.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   8.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   8.6  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 190 SSSDRAKGLAYADNTKQHNAANKN 119
           SSS  AKG A A    + N    N
Sbjct: 526 SSSPPAKGAAAAGQPSKRNGGETN 549


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +3

Query: 12 RPYRPEHR 35
          +PY PEH+
Sbjct: 63 KPYNPEHK 70


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +3

Query: 12 RPYRPEHR 35
          +PY PEH+
Sbjct: 64 KPYNPEHK 71


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -3

Query: 76  VASSGRGSARVFLCRCSGRYGR 11
           ++S+    +  + C+ S  YGR
Sbjct: 874 ISSAEASDSGAYFCQASNLYGR 895


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -3

Query: 76  VASSGRGSARVFLCRCSGRYGR 11
           ++S+    +  + C+ S  YGR
Sbjct: 870 ISSAEASDSGAYFCQASNLYGR 891


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,162
Number of Sequences: 438
Number of extensions: 490
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5388717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)