Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_C03
         (315 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   4.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    20   7.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    20   7.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    20   7.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    19   9.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    19   9.4  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 12/47 (25%), Positives = 17/47 (36%)
 Frame = -2

Query: 158 LKIREGDVFELSVDDGCRLELWSWLSQLQRHSVEIYDSLFEMSRKLR 18
           L +    ++EL  D     +   WL        EI + LF     LR
Sbjct: 277 LDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLR 323


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = -3

Query: 121 LTTAVVLNCGAGLVSCRGI 65
           + T + +NC    ++CR +
Sbjct: 165 IITMINMNCALWYINCRAV 183


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = -3

Query: 121 LTTAVVLNCGAGLVSCRGI 65
           + T + +NC    ++CR +
Sbjct: 165 IITMINMNCALWYINCRAV 183


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = -3

Query: 121 LTTAVVLNCGAGLVSCRGI 65
           + T + +NC    ++CR +
Sbjct: 165 IITMINMNCALWYINCRAV 183


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/18 (38%), Positives = 8/18 (44%)
 Frame = +3

Query: 261 GCEVIAGSTDSHFTHLAW 314
           GC  + G T     HL W
Sbjct: 321 GCGKVYGKTSHLKAHLRW 338


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 17  CVVFCSFRTNY 49
           CV+ C FR  Y
Sbjct: 163 CVIVCIFRGKY 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,353
Number of Sequences: 336
Number of extensions: 1020
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)