Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_C02
         (298 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.13 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.40 
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   1.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   2.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   2.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   2.1  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   2.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   3.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   3.7  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   3.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   4.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   8.5  
AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    19   8.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    19   8.5  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.4 bits (53), Expect = 0.13
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 278 IPAMTTGMMDFMICSKSITGMATIPMHDLAVPYAAPR 168
           +PAM+TG + + I  K+ T +  +  H L   YA  R
Sbjct: 68  LPAMSTGPLKYAIFQKNFTNIVNL-THLLETQYAKIR 103


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.40
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 42   LVPNSCSPGIH 10
            LVP +C+PG+H
Sbjct: 1229 LVPQNCAPGLH 1239


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 192 GCAICSTKGAEDDGRRRPHNSKERSIDW 109
           GC  C+ K  E   +   H +++R+ DW
Sbjct: 73  GCTKCNQKQKETAEKVIRHLTQKRARDW 100


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 207 YCRHAGDAF*ADHEIHHSRCHGGYHCH 287
           Y    GD F  +H I   +   GYH H
Sbjct: 42  YIPPGGDFF-GNHHIQQQQLQYGYHNH 67


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 207 YCRHAGDAF*ADHEIHHSRCHGGYHCH 287
           Y    GD F  +H I   +   GYH H
Sbjct: 42  YIPPGGDFF-GNHHIQQQQLQYGYHNH 67


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 207 YCRHAGDAF*ADHEIHHSRCHGGYHCH 287
           Y    GD F  +H I   +   GYH H
Sbjct: 42  YIPPGGDFF-GNHHIQQQQLQYGYHNH 67


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 207 YCRHAGDAF*ADHEIHHSRCHGGYHCH 287
           Y    GD F  +H I   +   GYH H
Sbjct: 42  YIPPGGDFF-GNHHIQQQQLQYGYHNH 67


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +1

Query: 256 IPVVMAGIIAIYGL 297
           +PV+++G+IA+ G+
Sbjct: 170 VPVLLSGLIAMCGM 183


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +1

Query: 256 IPVVMAGIIAIYGL 297
           +PV+++G+IA+ G+
Sbjct: 403 VPVLLSGLIAMCGM 416



 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 269  MTTGMMDFMICSKSITGM 216
            +T   +DF +CSK I  M
Sbjct: 1314 ITKTQLDFDLCSKPIDEM 1331


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +1

Query: 256 IPVVMAGIIAIYGL 297
           +PV+++G+IA+ G+
Sbjct: 403 VPVLLSGLIAMCGM 416



 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 269  MTTGMMDFMICSKSITGM 216
            +T   +DF +CSK I  M
Sbjct: 1314 ITKTQLDFDLCSKPIDEM 1331


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 297 QSVDGNDTRHDNGNDGFHDLLKKHHRHGDNT 205
           QSV   +T  D G+   HD   +H RH +++
Sbjct: 72  QSVPHPETEKDWGDGDKHD---RHERHFESS 99


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +3

Query: 225 DAF*ADHEIHHSRCHGGYH 281
           D +  +H ++H   H G+H
Sbjct: 433 DFYKMNHPVYHKDPHYGFH 451


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.4 bits (38), Expect = 8.5
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 119 DLSLELWGRRLPSS 160
           +++ EL+GRRL +S
Sbjct: 444 EITWELYGRRLSNS 457


>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 19.4 bits (38), Expect = 8.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 260 GMMDFMICSKSITGMATIPMHDLAVPYAAP 171
           GM+     +   T + ++ MH  A+P A P
Sbjct: 26  GMVVVFAPANITTEVKSVEMHHEALPEAVP 55


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 19.4 bits (38), Expect = 8.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 112 IYGPFFGVM 138
           I+G FFG+M
Sbjct: 38  IFGQFFGIM 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,200
Number of Sequences: 336
Number of extensions: 2131
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5322850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)