Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C02
(298 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 95 8e-21
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 95 8e-21
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 95 8e-21
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 95 8e-21
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 83 5e-17
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 83 5e-17
U21317-8|AAA62528.1| 267|Caenorhabditis elegans Hypothetical pr... 28 1.0
L23648-11|AAA28027.2| 244|Caenorhabditis elegans Hypothetical p... 27 2.4
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 27 3.2
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 3.2
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 26 5.6
U41991-12|AAA83352.1| 251|Caenorhabditis elegans Hypothetical p... 26 5.6
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 26 5.6
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z68106-2|CAA92126.2| 402|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 25 7.4
AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical... 25 7.4
Z81454-3|CAB03799.2| 378|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81147-3|CAB03530.1| 305|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 25 9.7
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 95.1 bits (226), Expect = 8e-21
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = +1
Query: 79 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSCIGIVAMPVMLFEQIMKSII 258
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS +GI +M VM E IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 259 PVVMAGIIAIYGL 297
PV+MAGII IYGL
Sbjct: 61 PVIMAGIIGIYGL 73
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 95.1 bits (226), Expect = 8e-21
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = +1
Query: 79 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSCIGIVAMPVMLFEQIMKSII 258
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS +GI +M VM E IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 259 PVVMAGIIAIYGL 297
PV+MAGII IYGL
Sbjct: 61 PVIMAGIIGIYGL 73
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 95.1 bits (226), Expect = 8e-21
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = +1
Query: 79 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSCIGIVAMPVMLFEQIMKSII 258
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS +GI +M VM E IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 259 PVVMAGIIAIYGL 297
PV+MAGII IYGL
Sbjct: 61 PVIMAGIIGIYGL 73
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 95.1 bits (226), Expect = 8e-21
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = +1
Query: 79 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSCIGIVAMPVMLFEQIMKSII 258
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS +GI +M VM E IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 259 PVVMAGIIAIYGL 297
PV+MAGII IYGL
Sbjct: 61 PVIMAGIIGIYGL 73
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 82.6 bits (195), Expect = 5e-17
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +1
Query: 103 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSCIGIVAMPVMLFEQIMKSIIPVVMAGII 282
E +YGPFFG +G SA+ F++ G+AYGTAK+ GI +M V + +MK+IIPVVMAGI+
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIV 76
Query: 283 AIYGL 297
AIYGL
Sbjct: 77 AIYGL 81
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 82.6 bits (195), Expect = 5e-17
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +1
Query: 103 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSCIGIVAMPVMLFEQIMKSIIPVVMAGII 282
E +YGPFFG +G SA+ F++ G+AYGTAK+ GI +M V + +MK+IIPVVMAGI+
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIV 76
Query: 283 AIYGL 297
AIYGL
Sbjct: 77 AIYGL 81
>U21317-8|AAA62528.1| 267|Caenorhabditis elegans Hypothetical
protein B0495.9 protein.
Length = 267
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 97 FFLNVGVFTGPKNSDDYLPRAEFMQPGDPL 8
F + +FTG +NS D L +F +PG P+
Sbjct: 115 FIMLSQMFTGDRNSADGLTNEDFTRPGIPM 144
>L23648-11|AAA28027.2| 244|Caenorhabditis elegans Hypothetical
protein F44B9.9 protein.
Length = 244
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +1
Query: 46 DSHQSFWDL*ILPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSCIGIVAMPV 225
D H F DL L ++R +EN P +G + + Y + CI +V
Sbjct: 38 DIHGQFEDLVRLLNTRNSSENAKSKPIYGFSTKKWVFLGDYVDRGY-KSLDCICLVFSLK 96
Query: 226 MLFEQIMKSIIPVVMA 273
LF +++I +++A
Sbjct: 97 SLFSCCFENVIDIILA 112
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -3
Query: 245 MICSKSITGMATIPMHDLAVPYAAPRELKMMADAAPITPKKGP 117
+I SK+I A + ++D+AV A+P E + A+P++ + P
Sbjct: 34 LIASKTIQTGA-VQVNDIAVAEASPAETDAKSSASPVSGPEPP 75
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -3
Query: 245 MICSKSITGMATIPMHDLAVPYAAPRELKMMADAAPITPKKGP 117
+I SK+I A + ++D+AV A+P E + A+P++ + P
Sbjct: 34 LIASKTIQTGA-VQVNDIAVAEASPAETDAKSSASPVSGPEPP 75
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 186 HSQVMHRYCRHAGDAF*ADHEIHHSRCHGGYH 281
H H + H GD H +HH HG +H
Sbjct: 632 HHAPHHEHHEHHGDHHHGSHGVHHGH-HGTHH 662
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2
Query: 270 HDNGNDGFHDLLKKHHRHGDNT 205
H + G HD + HH HG ++
Sbjct: 698 HHGAHHGHHDDKENHHHHGHHS 719
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 186 HSQVMHRYCRHAGDAF*ADHEIHH-SRCHGGYHCH 287
H + H H G +E HH S HGG+H H
Sbjct: 50 HHEESHHGEHHGGHHGVQHYESHHESHHHGGHHGH 84
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
protein F22E10.3 protein.
Length = 1327
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 79 LPHSRKMAE-NPIYGPFFGVMGAASAIIFSSLGAAYGTAKSCIGIVAMPVMLFEQIMKSI 255
L RK A + FFG + F G YG +GI+ P +F +M +
Sbjct: 317 LEKGRKFAVWKGFWSGFFGGLFFFWLFSFLGCGMLYGAYLLKVGIITTPGDVFIVVMSML 376
Query: 256 IPVVMAGIIA 285
+ G+I+
Sbjct: 377 LGAYFLGLIS 386
>U41991-12|AAA83352.1| 251|Caenorhabditis elegans Hypothetical
protein C42D4.1 protein.
Length = 251
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 285 GNDTRHDNGNDGFHDLLKKHHRHGDNTDA 199
G + RH NG G + + HR G++ DA
Sbjct: 209 GENPRHHNGGIGSGISMGERHRDGESYDA 237
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 79 LPHSRKMAE-NPIYGPFFGVMGAASAIIFSSLGAAYGTAKSCIGIVAMPVMLFEQIMKSI 255
L RK A + FFG + F G YG +GI+ P +F +M +
Sbjct: 317 LEKGRKFAVWKGFWSGFFGGLFFFWLFSFLGCGMLYGAYLLKVGIITTPGDVFIVVMSML 376
Query: 256 IPVVMAGIIA 285
+ G+I+
Sbjct: 377 LGAYFLGLIS 386
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
protein ZK593.4 protein.
Length = 1477
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 50 VIRVFGTCKYSHIQEKWPKIQSMDLSLELWGRRLPSSSAPLV 175
+++ FG C+ + EKW + L E R +PS+ L+
Sbjct: 161 IVQNFGGCEEVNEDEKWRDVAREYLPKEQMARGVPSAFINLI 202
>Z68106-2|CAA92126.2| 402|Caenorhabditis elegans Hypothetical
protein F41E7.3 protein.
Length = 402
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 129 WSYGGGVCHHLQL 167
W +GGG+CH L L
Sbjct: 103 WIFGGGLCHGLPL 115
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 261 GNDGFHDLLKKHHRHGDNTDA*LGCA 184
G DGFH ++KH H + L CA
Sbjct: 81 GKDGFHLRVRKHPFHVTRINKMLSCA 106
>AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical
protein T15B7.1 protein.
Length = 307
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 78 TPTFKKNGRKSNLWTFLWSYGGG 146
T T NG+++ +W + +YGGG
Sbjct: 94 TYTILVNGKETEVWCDMQTYGGG 116
>Z81454-3|CAB03799.2| 378|Caenorhabditis elegans Hypothetical
protein B0391.5 protein.
Length = 378
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 180 IWHSQVMHRYCRHAGDAF*ADHEIHHSRCHGG 275
I H +V R CR + H + + RC GG
Sbjct: 112 ICHKEVSLRLCRDWSILNFSHHNVKYQRCDGG 143
>Z81147-3|CAB03530.1| 305|Caenorhabditis elegans Hypothetical
protein T09E11.3 protein.
Length = 305
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = -2
Query: 147 RRPHNSKERSIDWIFGHFS*MWEYLQVPKTLMTICLVPNSCS 22
R+ NS+ + +D+I + L P+ + C++P S S
Sbjct: 23 RKAGNSEVKVVDYIIPFVNYSKRLLTAPENQLISCIIPKSMS 64
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 269 MTTGMMDFMICSKSITGMATIPMHDLAVPY 180
MTT MD M ++S+ M T+P D + +
Sbjct: 325 MTTSTMDSMDTTESVVTMTTMPEIDTKIVF 354
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 269 MTTGMMDFMICSKSITGMATIPMHDLAVPY 180
MTT MD M ++S+ M T+P D + +
Sbjct: 325 MTTSTMDSMDTTESVVTMTTMPEIDTKIVF 354
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,559,154
Number of Sequences: 27780
Number of extensions: 195192
Number of successful extensions: 483
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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