Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C01
(310 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 21 2.2
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 3.9
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 20 5.2
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 20 5.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 20 5.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 20 5.2
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 20 6.8
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 6.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 6.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 6.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 6.8
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 19 9.0
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 21.4 bits (43), Expect = 2.2
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -1
Query: 190 LVLGSSSHHAHQQHLWWSFWQ 128
L GS + + LWW F Q
Sbjct: 45 LAKGSLKQYTCELKLWWEFCQ 65
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.6 bits (41), Expect = 3.9
Identities = 8/31 (25%), Positives = 13/31 (41%)
Frame = +3
Query: 63 KNAITRSFTFSCGQTVPVHSTYCQKLHHRCC 155
+N + FT C Q + +K+ CC
Sbjct: 699 ENGNNKCFTMECPQVTCPDNMKLEKVPGECC 729
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 20.2 bits (40), Expect = 5.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 107 CLAAAERKATRDSIFMRKFTT 45
C + KA D M+K+TT
Sbjct: 230 CFSLFRGKALMDKSVMKKYTT 250
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 20.2 bits (40), Expect = 5.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 107 CLAAAERKATRDSIFMRKFTT 45
C + KA D M+K+TT
Sbjct: 544 CFSLFRGKALMDKSVMKKYTT 564
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.2 bits (40), Expect = 5.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 107 CLAAAERKATRDSIFMRKFTT 45
C + KA D M+K+TT
Sbjct: 777 CFSLFRGKALMDKSVMKKYTT 797
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.2 bits (40), Expect = 5.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 107 CLAAAERKATRDSIFMRKFTT 45
C + KA D M+K+TT
Sbjct: 777 CFSLFRGKALMDKSVMKKYTT 797
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 19.8 bits (39), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 306 READAKCVGTSYTSL*VEELEPFF 235
++A +K + T++TS + ELE F
Sbjct: 113 KDASSKRIXTAFTSTQLLELEREF 136
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 19.8 bits (39), Expect = 6.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 107 CLAAAERKATRDSIFMRKFTT 45
C + KA D M+K+TT
Sbjct: 804 CFSLFRGKALMDDNVMKKYTT 824
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 19.8 bits (39), Expect = 6.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 107 CLAAAERKATRDSIFMRKFTT 45
C + KA D M+K+TT
Sbjct: 804 CFSLFRGKALMDDNVMKKYTT 824
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 19.8 bits (39), Expect = 6.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 107 CLAAAERKATRDSIFMRKFTT 45
C + KA D M+K+TT
Sbjct: 804 CFSLFRGKALMDDNVMKKYTT 824
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 19.8 bits (39), Expect = 6.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 107 CLAAAERKATRDSIFMRKFTT 45
C + KA D M+K+TT
Sbjct: 804 CFSLFRGKALMDDNVMKKYTT 824
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 19.4 bits (38), Expect = 9.0
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = +3
Query: 111 PVHSTYCQK 137
P++ YCQK
Sbjct: 568 PIYDAYCQK 576
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,930
Number of Sequences: 336
Number of extensions: 1631
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 5624413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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