Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_C01
         (310 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011453-1|AAR99111.1|  243|Drosophila melanogaster RE36486p pro...    83   9e-17
AE014296-1726|AAF50212.1|  243|Drosophila melanogaster CG8189-PA...    83   9e-17
Y08967-1|CAA70164.1|  184|Drosophila melanogaster Fo-ATP synthas...    36   0.008
BT015306-1|AAT94534.1|  194|Drosophila melanogaster AT16129p pro...    27   3.6  
BT022311-1|AAY54727.1|  163|Drosophila melanogaster IP08241p pro...    27   4.7  
BT011511-1|AAS15647.1|  194|Drosophila melanogaster UT01525p pro...    27   4.7  
AE014296-3648|AAF51803.1|  194|Drosophila melanogaster CG14561-P...    27   4.7  
AE014134-2971|AAF53701.1|  121|Drosophila melanogaster CG15166-P...    27   4.7  
AE014296-2245|AAF49841.1|  152|Drosophila melanogaster CG17300-P...    26   8.2  

>BT011453-1|AAR99111.1|  243|Drosophila melanogaster RE36486p
           protein.
          Length = 243

 Score = 82.6 bits (195), Expect = 9e-17
 Identities = 45/81 (55%), Positives = 51/81 (62%)
 Frame = +1

Query: 67  MLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPVRLTEPGKVRLGFIPEEWF 246
           M SR AL +A   Q P T    RS+    A     +   RP     PGKVRLGF+PEEWF
Sbjct: 1   MFSRAALLTA---QRPLTVAATRSAAAAAAPGGAIERRQRP---EHPGKVRLGFLPEEWF 54

Query: 247 QFFHSKTGVTGPYTFGVGLTT 309
           QFF++KTGVTGPYTFGVGL T
Sbjct: 55  QFFYNKTGVTGPYTFGVGLIT 75


>AE014296-1726|AAF50212.1|  243|Drosophila melanogaster CG8189-PA,
           isoform A protein.
          Length = 243

 Score = 82.6 bits (195), Expect = 9e-17
 Identities = 45/81 (55%), Positives = 51/81 (62%)
 Frame = +1

Query: 67  MLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPVRLTEPGKVRLGFIPEEWF 246
           M SR AL +A   Q P T    RS+    A     +   RP     PGKVRLGF+PEEWF
Sbjct: 1   MFSRAALLTA---QRPLTVAATRSAAAAAAPGGAIERRQRP---EHPGKVRLGFLPEEWF 54

Query: 247 QFFHSKTGVTGPYTFGVGLTT 309
           QFF++KTGVTGPYTFGVGL T
Sbjct: 55  QFFYNKTGVTGPYTFGVGLIT 75


>Y08967-1|CAA70164.1|  184|Drosophila melanogaster Fo-ATP synthase
           subunit b protein.
          Length = 184

 Score = 36.3 bits (80), Expect = 0.008
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 262 KTGVTGPYTFGVGLTT 309
           KTGVTGPYTFGVGL T
Sbjct: 1   KTGVTGPYTFGVGLIT 16


>BT015306-1|AAT94534.1|  194|Drosophila melanogaster AT16129p
           protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 26/77 (33%), Positives = 33/77 (42%)
 Frame = +1

Query: 13  VLRSTYFTRFTVVNLRIKMLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPV 192
           +LR     +F     R  M SR+ALR       P T   +RS+TT  A     +   R  
Sbjct: 27  ILRQLIKQKFNTTFFR--MFSRLALR-------PLTVATSRSATTHSA-----QGLSRLP 72

Query: 193 RLTEPGKVRLGFIPEEW 243
               PGKVR GF  + W
Sbjct: 73  GHGSPGKVRPGFPSDNW 89


>BT022311-1|AAY54727.1|  163|Drosophila melanogaster IP08241p
           protein.
          Length = 163

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 22/60 (36%), Positives = 28/60 (46%)
 Frame = +1

Query: 64  KMLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPVRLTEPGKVRLGFIPEEW 243
           +M SR+ALR       P T   +RS+TT  A     +   R      PGKVR GF  + W
Sbjct: 11  RMFSRLALR-------PLTVATSRSATTHSA-----QGLSRLPGHGSPGKVRPGFPSDNW 58


>BT011511-1|AAS15647.1|  194|Drosophila melanogaster UT01525p
           protein.
          Length = 194

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 101 PNSPRTQHLLPEAPPQ 148
           P  P+ QHLLPE  PQ
Sbjct: 84  PKQPQRQHLLPEEEPQ 99


>AE014296-3648|AAF51803.1|  194|Drosophila melanogaster CG14561-PA
           protein.
          Length = 194

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 101 PNSPRTQHLLPEAPPQ 148
           P  P+ QHLLPE  PQ
Sbjct: 84  PKQPQRQHLLPEEEPQ 99


>AE014134-2971|AAF53701.1|  121|Drosophila melanogaster CG15166-PA
           protein.
          Length = 121

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 195 PDWSWEVLLITHTSNICGGASGNKCCV 115
           P   W  + + + SN C   S  +CC+
Sbjct: 2   PKLLWRTVQLINESNFCSSNSSRRCCI 28


>AE014296-2245|AAF49841.1|  152|Drosophila melanogaster CG17300-PA
           protein.
          Length = 152

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 22/59 (37%), Positives = 27/59 (45%)
 Frame = +1

Query: 67  MLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPVRLTEPGKVRLGFIPEEW 243
           M SR+ALR       P T   +RS+TT  A     +   R      PGKVR GF  + W
Sbjct: 1   MFSRLALR-------PLTVATSRSATTHSA-----QGLSRLPGHGSPGKVRPGFPSDNW 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,146,836
Number of Sequences: 53049
Number of extensions: 299231
Number of successful extensions: 1045
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)