Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C01
(310 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 48 1e-06
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 48 1e-06
AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical... 30 0.38
Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical p... 29 0.87
U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 2.7
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 2.7
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 2.7
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 2.7
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 27 2.7
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 27 3.5
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 27 3.5
AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical... 27 3.5
Z81589-5|CAB04722.1| 233|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z81589-4|CAB04721.1| 256|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z72518-1|CAA96699.2| 395|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 25 8.1
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 25 8.1
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 25 8.1
AC024201-12|AAL27266.1| 544|Caenorhabditis elegans Suppressor o... 25 8.1
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +1
Query: 163 RDEKNFPRPVRLTEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGL 303
RD N+P P R P K RL +P+ WF F TGV+GPY F GL
Sbjct: 90 RDLVNYPYPARPMYPPKSRLLMMPDSWFTPFQKVTGVSGPYLFFGGL 136
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 48.0 bits (109), Expect = 1e-06
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +1
Query: 163 RDEKNFPRPVRLTEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGL 303
RD N+P P R P K RL +P+ WF F TG +GPY F GL
Sbjct: 88 RDLTNYPYPSRPMYPPKTRLLMMPDSWFTAFQKVTGTSGPYLFFGGL 134
>AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical
protein F33D11.12 protein.
Length = 260
Score = 29.9 bits (64), Expect = 0.38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 148 LWWSFWQ*VLCTGTVWPQ 95
L+W WQ VLC G W Q
Sbjct: 144 LYWGVWQFVLCVGAEWQQ 161
>Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical
protein F55C5.11 protein.
Length = 205
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 242 HSSGMNPSLTLPGSVSLTGLG 180
HSS NP L +P S++LTG G
Sbjct: 155 HSSNNNPKLHMPESLTLTGSG 175
>U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical
protein C04G6.2 protein.
Length = 280
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Frame = +3
Query: 15 PTVDIFYEIYSGEFTHKNAITRSFTFSCGQT-----VPVHSTYCQ--KLHHRCCWCA**E 173
PT Y + E N T S+T SC ++ P+++T C + WCA E
Sbjct: 139 PTGTFAYFVAGTEMQGSNGGTDSYTVSCEESACSACTPIYNTGCMGYGVPSPTNWCAIGE 198
Query: 174 ELPKT 188
++P T
Sbjct: 199 DIPVT 203
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 254 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 93
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 254 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 93
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 254 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 93
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 123 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 176
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 254 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 93
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 254 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 93
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 254 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 93
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 254 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 93
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 254 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 93
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 123 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 176
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 254 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 93
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 254 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 93
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 46 VVNLRIKMLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPVRLTE 204
VVN + +VA+ +AAA Q+ A++A + VA + P+ T+
Sbjct: 54 VVNSTAQQQQKVAVAAAAAAQAAQAAVVATAQIRKVASAPPTTSTDPPLSYTQ 106
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 46 VVNLRIKMLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPVRLTE 204
VVN + +VA+ +AAA Q+ A++A + VA + P+ T+
Sbjct: 354 VVNSTAQQQQKVAVAAAAAAQAAQAAVVATAQIRKVASAPPTTSTDPPLSYTQ 406
>AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical
protein Y116A8C.16c protein.
Length = 982
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 230 MNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLA 129
++PS +LPG V + K SS T V+ELLA
Sbjct: 158 IHPSASLPGRVGKSSFLKKKSSSTQEDVVLELLA 191
>Z81589-5|CAB04722.1| 233|Caenorhabditis elegans Hypothetical
protein T08G5.9 protein.
Length = 233
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +2
Query: 125 LLPEAPPQMLLVCVMRRTSQDQSGSLNLVK*DSDSFLKNGSSSSTQRLV 271
++P++ ++ L+C S+ +++ DSD+ L NG S +++V
Sbjct: 145 VIPKSKCEIALICRPTGKSESDQMTISYKTVDSDNDLANGCFSEMEKIV 193
>Z81589-4|CAB04721.1| 256|Caenorhabditis elegans Hypothetical
protein T08G5.8 protein.
Length = 256
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +2
Query: 125 LLPEAPPQMLLVCVMRRTSQDQSGSLNLVK*DSDSFLKNGSSSSTQRLV 271
++P++ ++ L+C S+ +++ DSD+ L NG S +++V
Sbjct: 168 VIPKSKCEIALICRPTGKSESDQMTISYKTVDSDNDLANGCFSEMEKIV 216
>Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical
protein C01A2.1 protein.
Length = 465
Score = 26.2 bits (55), Expect = 4.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 102 QTVPVHSTYCQKLHHRCCWC 161
Q P TYC++++H C C
Sbjct: 434 QCTPKPCTYCKRINHHCSIC 453
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -3
Query: 263 FEWKNWNHSSGMNPS-LTLPGSV 198
FEW+ WN S +PS L + GS+
Sbjct: 958 FEWREWNMISDNHPSELGVEGSI 980
>Z72518-1|CAA96699.2| 395|Caenorhabditis elegans Hypothetical
protein ZC374.1 protein.
Length = 395
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 148 LWWSFWQ*VLCTGTVWPQLNVKLRVIAFLC 59
+W S+W VW Q ++ RV +FLC
Sbjct: 75 IWRSYW----IYNIVWTQGDIMCRVFSFLC 100
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 25.4 bits (53), Expect = 8.1
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Frame = +2
Query: 110 PRTQHLLPE---APP----QMLLVCVMRRTSQDQSGSLNLV 211
P+T HL+PE APP QM + + SQ Q S N+V
Sbjct: 864 PKTSHLVPESIPAPPFEPVQMPIPAPPAQVSQPQEQSSNMV 904
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = -3
Query: 224 PSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAAERKATRDSIFMR---- 57
P PG+++L G+F R T+++ L + A E D + +R
Sbjct: 132 PLTDAPGALALMKNGEFSKLRDSITAILSSLPKEITLSEKNACKEAFRALDQLLIRDAAD 191
Query: 56 -KFTTVNLVKY 27
FT +N KY
Sbjct: 192 SSFTAINTGKY 202
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = -3
Query: 224 PSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAAERKATRDSIFMR---- 57
P PG+++L G+F R T+++ L + A E D + +R
Sbjct: 132 PLTDAPGALALMKNGEFSKLRDSITAILSSLPKEITLSEKNACKEAFRALDQLLIRDAAD 191
Query: 56 -KFTTVNLVKY 27
FT +N KY
Sbjct: 192 SSFTAINTGKY 202
>AC024201-12|AAL27266.1| 544|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform b protein.
Length = 544
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = -3
Query: 224 PSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAAERKATRDSIFMR---- 57
P PG+++L G+F R T+++ L + A E D + +R
Sbjct: 132 PLTDAPGALALMKNGEFSKLRDSITAILSSLPKEITLSEKNACKEAFRALDQLLIRDAAD 191
Query: 56 -KFTTVNLVKY 27
FT +N KY
Sbjct: 192 SSFTAINTGKY 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,605,653
Number of Sequences: 27780
Number of extensions: 148272
Number of successful extensions: 445
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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