Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_B24
         (121 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8A4M6 Cluster: Glutamate/gamma-aminobutyrate anti-port...    31   6.7  
UniRef50_Q4Q655 Cluster: Putative uncharacterized protein; n=3; ...    31   6.7  
UniRef50_UPI000023D3D9 Cluster: hypothetical protein FG09520.1; ...    30   8.8  

>UniRef50_Q8A4M6 Cluster: Glutamate/gamma-aminobutyrate anti-porter;
           n=16; Bacteria|Rep: Glutamate/gamma-aminobutyrate
           anti-porter - Bacteroides thetaiotaomicron
          Length = 570

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +2

Query: 20  NGPAGMGECTHFSTPPFRPPPVGGMT*A--GQPAGG 121
           +GPA  G  T  STP   P P GG T A  G P  G
Sbjct: 526 SGPASAGSTTSGSTPTSNPAPSGGNTAASNGSPDSG 561


>UniRef50_Q4Q655 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 481

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = -3

Query: 116 RLADLPRSCLLREAGEKVGLRSVYTPPSPLGH 21
           RLA LP S LL   G  V +  V  PP+PL H
Sbjct: 81  RLATLPTSPLLPRFGAFVSILVVGAPPTPLAH 112


>UniRef50_UPI000023D3D9 Cluster: hypothetical protein FG09520.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG09520.1 - Gibberella zeae PH-1
          Length = 765

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 7   GLVVQWPSGDGGVYTLLNPTFSPASRRRHDLGR 105
           G    W   +G V  +LNPT  P    RHD G+
Sbjct: 431 GFTRYWKLTEGTVIGILNPTIMPPPPGRHDTGK 463


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,292,737
Number of Sequences: 1657284
Number of extensions: 2646922
Number of successful extensions: 10143
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10126
length of database: 575,637,011
effective HSP length: 20
effective length of database: 542,491,331
effective search space used: 10307335289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)