Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_B24
(121 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC125038-1|AAI25039.1| 146|Homo sapiens chromosome 8 open readi... 29 2.7
AL450995-1|CAH71144.1| 670|Homo sapiens activating transcriptio... 29 3.6
AL391825-2|CAH73985.1| 670|Homo sapiens activating transcriptio... 29 3.6
AL359541-1|CAH74152.1| 670|Homo sapiens activating transcriptio... 29 3.6
AB208929-1|BAD92166.1| 578|Homo sapiens activating transcriptio... 29 3.6
AB015856-1|BAA34722.1| 670|Homo sapiens ATF6 protein. 29 3.6
M97287-1|AAA60304.1| 763|Homo sapiens SATB1 protein. 28 4.7
BC001744-1|AAH01744.1| 763|Homo sapiens SATB1 protein protein. 28 4.7
AB209761-1|BAD92998.1| 797|Homo sapiens special AT-rich sequenc... 28 4.7
D63997-1|BAA23661.1| 1530|Homo sapiens GCP170 protein. 28 6.3
BC146675-1|AAI46676.1| 1134|Homo sapiens GOLGA3 protein protein. 28 6.3
BC142658-1|AAI42659.1| 1134|Homo sapiens GOLGA3 protein protein. 28 6.3
BC060826-1|AAH60826.1| 843|Homo sapiens GOLGA3 protein protein. 28 6.3
BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein. 28 6.3
AF485338-1|AAL93149.1| 1498|Homo sapiens golgin-160 protein. 28 6.3
AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein. 28 6.3
AB027133-1|BAB71953.1| 1390|Homo sapiens male enhanced antigen-2... 28 6.3
>BC125038-1|AAI25039.1| 146|Homo sapiens chromosome 8 open reading
frame 71 protein.
Length = 146
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 121 PPGWLTCLGHASYGRRAKRWG*EVCTLPHP 32
PP W+ ++YG R +RW ++ TLP P
Sbjct: 86 PPPWVQLQLSSAYGARQQRW--QLSTLPEP 113
>AL450995-1|CAH71144.1| 670|Homo sapiens activating transcription
factor 6 protein.
Length = 670
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 55 LNPTFSPASRRRHDLGRSA 111
+NP+ SPA++RRH LG SA
Sbjct: 405 MNPSVSPANQRRHLLGFSA 423
>AL391825-2|CAH73985.1| 670|Homo sapiens activating transcription
factor 6 protein.
Length = 670
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 55 LNPTFSPASRRRHDLGRSA 111
+NP+ SPA++RRH LG SA
Sbjct: 405 MNPSVSPANQRRHLLGFSA 423
>AL359541-1|CAH74152.1| 670|Homo sapiens activating transcription
factor 6 protein.
Length = 670
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 55 LNPTFSPASRRRHDLGRSA 111
+NP+ SPA++RRH LG SA
Sbjct: 405 MNPSVSPANQRRHLLGFSA 423
>AB208929-1|BAD92166.1| 578|Homo sapiens activating transcription
factor 6 variant protein.
Length = 578
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 55 LNPTFSPASRRRHDLGRSA 111
+NP+ SPA++RRH LG SA
Sbjct: 406 MNPSVSPANQRRHLLGFSA 424
>AB015856-1|BAA34722.1| 670|Homo sapiens ATF6 protein.
Length = 670
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 55 LNPTFSPASRRRHDLGRSA 111
+NP+ SPA++RRH LG SA
Sbjct: 405 MNPSVSPANQRRHLLGFSA 423
>M97287-1|AAA60304.1| 763|Homo sapiens SATB1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 14 SCNGPAGMGECTHFSTPPFRPPPVGGMT*AGQPAG 118
S N + MG STPP RPP V T A + G
Sbjct: 451 SLNAASAMGPAPLISTPPSRPPQVKTATIATERNG 485
>BC001744-1|AAH01744.1| 763|Homo sapiens SATB1 protein protein.
Length = 763
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 14 SCNGPAGMGECTHFSTPPFRPPPVGGMT*AGQPAG 118
S N + MG STPP RPP V T A + G
Sbjct: 451 SLNAASAMGPAPLISTPPSRPPQVKTATIATERNG 485
>AB209761-1|BAD92998.1| 797|Homo sapiens special AT-rich sequence
binding protein 1 variant protein.
Length = 797
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 14 SCNGPAGMGECTHFSTPPFRPPPVGGMT*AGQPAG 118
S N + MG STPP RPP V T A + G
Sbjct: 453 SLNAASAMGPAPLISTPPSRPPQVKTATIATERNG 487
>D63997-1|BAA23661.1| 1530|Homo sapiens GCP170 protein.
Length = 1530
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 5 EASSCNGPAGMGECTHFSTPPFRPPP 82
E S +GP G C + TPPF PP
Sbjct: 54 EGESPDGPGQGGLCQNGPTPPFPDPP 79
>BC146675-1|AAI46676.1| 1134|Homo sapiens GOLGA3 protein protein.
Length = 1134
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 5 EASSCNGPAGMGECTHFSTPPFRPPP 82
E S +GP G C + TPPF PP
Sbjct: 54 EGESPDGPGQGGLCQNGPTPPFPDPP 79
>BC142658-1|AAI42659.1| 1134|Homo sapiens GOLGA3 protein protein.
Length = 1134
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 5 EASSCNGPAGMGECTHFSTPPFRPPP 82
E S +GP G C + TPPF PP
Sbjct: 54 EGESPDGPGQGGLCQNGPTPPFPDPP 79
>BC060826-1|AAH60826.1| 843|Homo sapiens GOLGA3 protein protein.
Length = 843
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 5 EASSCNGPAGMGECTHFSTPPFRPPP 82
E S +GP G C + TPPF PP
Sbjct: 54 EGESPDGPGQGGLCQNGPTPPFPDPP 79
>BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein.
Length = 582
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 59 TPPFRPPPVGGMT*AGQPAG 118
TPP RPPP GG GQP G
Sbjct: 448 TPPQRPPPQGG---PGQPQG 464
>AF485338-1|AAL93149.1| 1498|Homo sapiens golgin-160 protein.
Length = 1498
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 5 EASSCNGPAGMGECTHFSTPPFRPPP 82
E S +GP G C + TPPF PP
Sbjct: 54 EGESPDGPGQGGLCQNGPTPPFPDPP 79
>AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein.
Length = 582
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 59 TPPFRPPPVGGMT*AGQPAG 118
TPP RPPP GG GQP G
Sbjct: 448 TPPQRPPPQGG---PGQPQG 464
>AB027133-1|BAB71953.1| 1390|Homo sapiens male enhanced antigen-2
protein.
Length = 1390
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 5 EASSCNGPAGMGECTHFSTPPFRPPP 82
E S +GP G C + TPPF PP
Sbjct: 54 EGESPDGPGQGGLCQNGPTPPFPDPP 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,152,072
Number of Sequences: 237096
Number of extensions: 449146
Number of successful extensions: 1391
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 76,859,062
effective HSP length: 20
effective length of database: 72,117,142
effective search space used: 1370225698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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