Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_B23
(302 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.21
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 0.83
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 0.83
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 1.9
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 2.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 4.4
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 20 5.8
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 20 5.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 5.8
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 20 5.8
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 20 5.8
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 20 5.8
AB095513-1|BAC76335.1| 39|Apis mellifera brood-complex protein. 20 5.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 7.7
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.21
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -1
Query: 137 TILSTSMQNNSRQQFKYCINVQFTGEYNNSYEN 39
++ + ++ NN+ ++ Y N YNN+Y N
Sbjct: 317 SLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNN 349
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 0.83
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 125 TSMQNNSRQQFKYCINVQFTGEYNNSYENIRDSN 24
+S+ NN +KY + YNN+Y N ++N
Sbjct: 83 SSLSNN----YKYSNYNNYNNNYNNNYNNNYNNN 112
Score = 20.6 bits (41), Expect = 4.4
Identities = 8/39 (20%), Positives = 18/39 (46%)
Frame = -1
Query: 152 ETHFCTILSTSMQNNSRQQFKYCINVQFTGEYNNSYENI 36
E + LS + + ++ + N + YNN+Y+ +
Sbjct: 78 EPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKL 116
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 0.83
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 125 TSMQNNSRQQFKYCINVQFTGEYNNSYENIRDSN 24
+S+ NN +KY + YNN+Y N ++N
Sbjct: 83 SSLSNN----YKYSNYNNYNNNYNNNYNNNYNNN 112
Score = 20.6 bits (41), Expect = 4.4
Identities = 8/39 (20%), Positives = 18/39 (46%)
Frame = -1
Query: 152 ETHFCTILSTSMQNNSRQQFKYCINVQFTGEYNNSYENI 36
E + LS + + ++ + N + YNN+Y+ +
Sbjct: 78 EPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKL 116
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 1.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 82 SMYNLPANITTVTKISVTQT 23
S +LPA ITT T + T T
Sbjct: 99 SSTSLPATITTTTTTTTTTT 118
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 2.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 20 ICLSHGYFRNCCYI 61
+ LSHG FR+ C I
Sbjct: 120 VWLSHGIFRSSCDI 133
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 20.6 bits (41), Expect = 4.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 61 SPVNCTLIQYLNCCR 105
SPV +QY CC+
Sbjct: 337 SPVRPATVQYDTCCQ 351
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 20.2 bits (40), Expect = 5.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 183 AEIAVVLLLTLPIASPSR 236
A +AVVL T +A+P R
Sbjct: 1 ALVAVVLCTTATLAAPQR 18
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 20.2 bits (40), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 52 LLYSPVNCTLIQYLN 96
L YSPV T + Y+N
Sbjct: 265 LYYSPVASTSLYYVN 279
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.2 bits (40), Expect = 5.8
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -1
Query: 59 YNNSYENIRDSN 24
YNN+Y N ++N
Sbjct: 334 YNNNYNNYNNNN 345
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.2 bits (40), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 52 LLYSPVNCTLIQYLN 96
L YSPV T + Y+N
Sbjct: 265 LYYSPVASTSLYYVN 279
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.2 bits (40), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 52 LLYSPVNCTLIQYLN 96
L YSPV T + Y+N
Sbjct: 265 LYYSPVASTSLYYVN 279
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.2 bits (40), Expect = 5.8
Identities = 5/20 (25%), Positives = 12/20 (60%)
Frame = -1
Query: 71 FTGEYNNSYENIRDSNKFIE 12
+ +++EN+RD F++
Sbjct: 14 YQSSITSAFENLRDDEDFVD 33
>AB095513-1|BAC76335.1| 39|Apis mellifera brood-complex protein.
Length = 39
Score = 20.2 bits (40), Expect = 5.8
Identities = 5/20 (25%), Positives = 12/20 (60%)
Frame = -1
Query: 71 FTGEYNNSYENIRDSNKFIE 12
+ +++EN+RD F++
Sbjct: 14 YQSSITSAFENLRDDEDFVD 33
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.8 bits (39), Expect = 7.7
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -3
Query: 210 SIAERQLFRRKETMLRLSTGDSFLHNI 130
++ ER+ FRR+E M + +F + +
Sbjct: 591 TVEEREEFRRQERMRYAAPHKAFTYRM 617
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,238
Number of Sequences: 438
Number of extensions: 1763
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6368931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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