Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_B22
(352 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0730 - 31552747-31553088,31553583-31553646,31553743-315538... 142 7e-35
05_07_0131 + 27898028-27898042,27898159-27898274,27898361-278984... 140 4e-34
01_06_0180 - 27260099-27260440,27261236-27261350,27261403-272615... 119 7e-28
09_02_0235 + 6122145-6122206,6122408-6122417,6123515-6123549,612... 31 0.34
01_06_0763 + 31800556-31800618,31800659-31800802,31800859-318009... 29 1.4
04_01_0014 - 231228-233179,233522-233714 27 4.1
06_01_0637 + 4635136-4635969 27 5.5
07_03_0945 - 22791754-22791863,22792295-22792367,22792457-227925... 26 7.2
04_04_1397 - 33230416-33230742,33230852-33231007,33231130-332315... 26 7.2
04_01_0122 + 1267048-1267149,1267764-1267855,1268137-1268234,126... 26 7.2
06_01_1196 + 10289708-10289823,10290828-10291541,10291614-102920... 26 9.6
04_04_0838 - 28550036-28550237,28550595-28550676,28550972-285510... 26 9.6
03_06_0106 - 31682200-31682775 26 9.6
03_02_0052 + 5285061-5285106,5285711-5285754,5286317-5286539,528... 26 9.6
02_04_0489 + 23404757-23404812,23406170-23406296,23406418-234064... 26 9.6
01_06_1243 - 35681569-35681712,35681799-35681904,35682054-356821... 26 9.6
>01_06_0730 -
31552747-31553088,31553583-31553646,31553743-31553858,
31553964-31553978
Length = 178
Score = 142 bits (344), Expect = 7e-35
Identities = 58/110 (52%), Positives = 87/110 (79%)
Frame = +3
Query: 21 EYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYCLRQLKKFKKTTGEIVSSKEIP 200
+Y+V+GR LP+ ++ P +Y+M++++ + + AKS+FWY LR+LKK KK+ G+I++ EI
Sbjct: 8 QYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIF 67
Query: 201 EKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHR 350
EK+P IKN+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR
Sbjct: 68 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHR 117
>05_07_0131 +
27898028-27898042,27898159-27898274,27898361-27898424,
27899450-27899791
Length = 178
Score = 140 bits (338), Expect = 4e-34
Identities = 56/110 (50%), Positives = 86/110 (78%)
Frame = +3
Query: 21 EYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYCLRQLKKFKKTTGEIVSSKEIP 200
+Y+V+GR LP+ + P +Y+M++++ + + AKS+FWY LR+LKK KK+ G++++ EI
Sbjct: 8 QYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 67
Query: 201 EKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHR 350
E++P IKN+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR
Sbjct: 68 ERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHR 117
>01_06_0180 -
27260099-27260440,27261236-27261350,27261403-27261518,
27261594-27261608
Length = 195
Score = 119 bits (286), Expect = 7e-28
Identities = 56/127 (44%), Positives = 86/127 (67%), Gaps = 17/127 (13%)
Frame = +3
Query: 21 EYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRF----------W-------YCLRQL 149
+Y+V+GR LP+ + P +Y+M++++ + + AKS+F W Y LR+L
Sbjct: 8 QYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFCSSYLVRFADWGACPVCRYFLRKL 67
Query: 150 KKFKKTTGEIVSSKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYR 329
KK KK+ G++++ EI E++P IKN+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y
Sbjct: 68 KKVKKSNGQMLAINEIFERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT 127
Query: 330 DMGARHR 350
+M +RHR
Sbjct: 128 EMASRHR 134
>09_02_0235 +
6122145-6122206,6122408-6122417,6123515-6123549,
6124422-6124842,6124978-6125412
Length = 320
Score = 30.7 bits (66), Expect = 0.34
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 296 QVTVFTVHIVDTRARLVTQPDTKVLNLNRTLFWNFFAGYNFTSSLFELLQLPQAIPE 126
+++ F V I +L+ P+T VLNL + +F T+ L E L +P+ I E
Sbjct: 185 EISDFDVLIGHPIEKLIDVPETGVLNLKIEIIISFVPVLQSTNCLMEPLPIPEPIKE 241
>01_06_0763 +
31800556-31800618,31800659-31800802,31800859-31800980,
31801742-31801807,31801891-31801998,31802226-31802292,
31802716-31802800,31803169-31803329,31803490-31803591,
31803807-31804029,31804155-31804300
Length = 428
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 108 IVAKSRFWYCLRQLKKFKKTTGEIVSSKEIPEKSPVKIKNFGIWLRYESRSGVH 269
+V K LR+L + E+V +E+PE P+K ++ + LR +R H
Sbjct: 353 LVCKEAAMQPLRRLMSVLEARDELVPEEELPEVGPLKPEDIEVALR-NTRPSAH 405
>04_01_0014 - 231228-233179,233522-233714
Length = 714
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -1
Query: 136 QYQKRDFATIGSGEKILILYRGGFGSLSEGSLRPMT 29
+Y D AT EK L GGFGS+ +G LR +T
Sbjct: 407 RYSDLDHATKNFSEK---LGEGGFGSVFKGVLRDLT 439
>06_01_0637 + 4635136-4635969
Length = 277
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 100 GEKILILYRGGFGSLSEGSLRPMTSYSFNSP 8
G IL LY G F + +G P+T YS P
Sbjct: 202 GLTILELYTGSFPLVEQGQSIPLTCYSDGPP 232
>07_03_0945 -
22791754-22791863,22792295-22792367,22792457-22792552,
22793268-22793331,22793957-22794008,22794525-22794622,
22795108-22795166,22795981-22796013
Length = 194
Score = 26.2 bits (55), Expect = 7.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 234 IWLRYESRSGVHNMYREY 287
+WL++ S SG ++YR Y
Sbjct: 94 VWLQFPSNSGAKHVYRRY 111
>04_04_1397 -
33230416-33230742,33230852-33231007,33231130-33231543,
33234177-33234307,33235076-33235202,33235709-33236209,
33237624-33237935,33238690-33238719
Length = 665
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 150 KKFKKTTGEIVSSKEIPEKSPVKIKNFGIWLRYESRS 260
+K + G+ V+ K++ + KNFG+W ES++
Sbjct: 54 RKMLERAGKRVTKKQVKWRWAKSRKNFGMWTWLESKA 90
>04_01_0122 +
1267048-1267149,1267764-1267855,1268137-1268234,
1268333-1268488,1268736-1269355,1269480-1269547,
1269848-1270099,1270390-1270525,1271054-1271246,
1271386-1271939
Length = 756
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 190 LLDTISPVVFLNFFNCLKQYQKRDFATIGSGEKI 89
L+ I+P+ +L FFNC+ +D T G I
Sbjct: 613 LIYDINPLDYLKFFNCMGGLGSQDNCTTTKGSVI 646
>06_01_1196 +
10289708-10289823,10290828-10291541,10291614-10292058,
10292329-10293642
Length = 862
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 12 ELKEYEVIGRKLPSESEPKPPLYKMR 89
E++E+E ++PSE E P L MR
Sbjct: 365 EIREWETFYSQIPSELESNPNLEAMR 390
>04_04_0838 -
28550036-28550237,28550595-28550676,28550972-28551011,
28551342-28551416,28551448-28551543,28551710-28551805,
28551897-28551974,28552064-28552170,28552450-28552477,
28552777-28552898,28554106-28554172,28554336-28554508,
28554763-28554846,28555616-28555733,28556093-28556164,
28557026-28557118,28557484-28557636,28558000-28558086,
28559436-28559528,28560416-28560643,28561106-28561207,
28561390-28561596,28561798-28561846,28562385-28562537,
28562649-28562712,28562905-28563175,28564008-28564072,
28564184-28564337
Length = 1052
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 97 EKILILYRGGFGSLSEGSLRPMTSYSFNSPLV 2
+K+ ++ G GSL L+P F+SPL+
Sbjct: 520 KKLYLMNEGAVGSLLSKYLKPYMISQFSSPLI 551
>03_06_0106 - 31682200-31682775
Length = 191
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 21 EYEVIGRKLPSESEPKPPL 77
EY +I R LP+ S P PP+
Sbjct: 23 EYSLIHRNLPAVSSPLPPV 41
>03_02_0052 +
5285061-5285106,5285711-5285754,5286317-5286539,
5286664-5286827,5286918-5288144
Length = 567
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 214 TGLFSGISLLDTISPVVFLNFFNCLKQ 134
T ++ +LDT S ++F+N +N L+Q
Sbjct: 356 TAFYAAARMLDTGSTLMFMNEYNTLEQ 382
>02_04_0489 +
23404757-23404812,23406170-23406296,23406418-23406487,
23406997-23407102,23407185-23407296,23407792-23407914,
23408017-23408176,23408300-23408376,23408474-23408526,
23408700-23408754,23409049-23409683,23410412-23410733,
23410838-23411146,23411468-23411470
Length = 735
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = -3
Query: 308 TTYTQVTVFTVHIVDTRARLVTQPDTKVLNLNRTLFWNFFAGYNFTSSLFELLQLPQAIP 129
T +V V + + + V++L T+ N+++ L+ LP + P
Sbjct: 463 TVADEVKVDAAVVAGGSTTAMAADEATVVSLLSTIVDNYYSINTSEEPARRLIPLPLSQP 522
Query: 128 ETRFCHNRIRREN 90
TRF + I EN
Sbjct: 523 TTRFINININAEN 535
>01_06_1243 -
35681569-35681712,35681799-35681904,35682054-35682149,
35682234-35682361,35683000-35683260,35683343-35683428,
35683524-35683616,35683720-35683815,35683946-35684300
Length = 454
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 240 LRYESRSGVHNMYREYRDLSVGGAVTQCYRD 332
L YE G+ N + VG AVT Y D
Sbjct: 191 LIYEQNKGIQNPIINLKGFMVGNAVTDDYHD 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,106,327
Number of Sequences: 37544
Number of extensions: 172790
Number of successful extensions: 549
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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