Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_B21
(436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 33 0.068
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 33 0.068
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 33 0.068
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 33 0.068
AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical ... 33 0.12
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 31 0.36
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 0.36
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 0.36
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 30 0.63
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 30 0.63
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 29 1.1
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 29 1.1
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 29 1.1
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 29 1.9
U39652-5|AAV28338.1| 986|Caenorhabditis elegans Hypothetical pr... 29 1.9
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 28 2.5
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 28 2.5
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 28 2.5
U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical pr... 28 2.5
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 2.5
AF003142-5|ABQ13067.1| 474|Caenorhabditis elegans Hypothetical ... 28 2.5
AF003142-4|AAK73888.1| 856|Caenorhabditis elegans Hypothetical ... 28 2.5
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 28 2.5
Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical pr... 28 3.4
U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL034393-10|CAA22323.1| 228|Caenorhabditis elegans Hypothetical... 28 3.4
AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical ... 28 3.4
AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein. 28 3.4
U32305-6|AAV58892.1| 411|Caenorhabditis elegans Hypothetical pr... 27 4.4
U32305-5|AAK18855.2| 501|Caenorhabditis elegans Hypothetical pr... 27 4.4
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 27 4.4
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 27 4.4
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 27 4.4
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 27 4.4
AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila od... 27 4.4
Z83228-4|CAB05735.2| 318|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z79759-3|CAB02136.1| 225|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical pr... 27 5.9
AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical ... 27 5.9
AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical ... 27 5.9
AC098856-8|ABO52819.1| 384|Caenorhabditis elegans Hypothetical ... 27 5.9
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 27 5.9
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 27 7.8
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 27 7.8
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 27 7.8
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 27 7.8
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 27 7.8
AL023828-25|CAD56605.1| 167|Caenorhabditis elegans Hypothetical... 27 7.8
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 27 7.8
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 27 7.8
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.068
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 156 RVSH*TATQFTDFGRTARATKSSGGFRTTSSSDRDPSVAGSNPGGELPPTA 308
R S T + F+ + R++ + S RTTS + SV SNP PPTA
Sbjct: 9 RYSVLTTSSFSSWRRSSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTA 59
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 33.5 bits (73), Expect = 0.068
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 156 RVSH*TATQFTDFGRTARATKSSGGFRTTSSSDRDPSVAGSNPGGELPPTA 308
R S T + F+ + R++ + S RTTS + SV SNP PPTA
Sbjct: 13 RYSVLTTSSFSSWRRSSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTA 63
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.068
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 156 RVSH*TATQFTDFGRTARATKSSGGFRTTSSSDRDPSVAGSNPGGELPPTA 308
R S T + F+ + R++ + S RTTS + SV SNP PPTA
Sbjct: 9 RYSVLTTSSFSSWRRSSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTA 59
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 33.5 bits (73), Expect = 0.068
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 156 RVSH*TATQFTDFGRTARATKSSGGFRTTSSSDRDPSVAGSNPGGELPPTA 308
R S T + F+ + R++ + S RTTS + SV SNP PPTA
Sbjct: 13 RYSVLTTSSFSSWRRSSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTA 63
>AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical
protein C53D5.4 protein.
Length = 301
Score = 32.7 bits (71), Expect = 0.12
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 316 YKCGLCVKTYMYLHSLRKHMLTH 384
YKC C KT+ H L +H+LTH
Sbjct: 231 YKCRDCEKTFRQKHGLNQHLLTH 253
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 31.1 bits (67), Expect = 0.36
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 307 QRRYKCGLCVKTYMYLHSLRKHMLTH 384
QR YKC +C K + + H L +H H
Sbjct: 506 QRPYKCDICEKAFKHKHHLTEHKRLH 531
Score = 30.7 bits (66), Expect = 0.48
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 295 SPQQQRRYKCGLCVKTYMYLHSLRKHMLTH 384
S + R++KC C K + + H L++H+ H
Sbjct: 17 SDEALRKFKCPECTKAFKFKHHLKEHIRIH 46
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 10 YQCQVCGKGYIESSSYKKHM 69
++CQ C K + S SY HM
Sbjct: 52 FECQQCHKRFSHSGSYSSHM 71
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 31.1 bits (67), Expect = 0.36
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 307 QRRYKCGLCVKTYMYLHSLRKHMLTH 384
QR YKC +C K + + H L +H H
Sbjct: 506 QRPYKCDICEKAFKHKHHLTEHKRLH 531
Score = 30.7 bits (66), Expect = 0.48
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 295 SPQQQRRYKCGLCVKTYMYLHSLRKHMLTH 384
S + R++KC C K + + H L++H+ H
Sbjct: 17 SDEALRKFKCPECTKAFKFKHHLKEHIRIH 46
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 10 YQCQVCGKGYIESSSYKKHM 69
++CQ C K + S SY HM
Sbjct: 52 FECQQCHKRFSHSGSYSSHM 71
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 31.1 bits (67), Expect = 0.36
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 307 QRRYKCGLCVKTYMYLHSLRKHMLTH 384
QR YKC +C K + + H L +H H
Sbjct: 506 QRPYKCDICEKAFKHKHHLTEHKRLH 531
Score = 30.7 bits (66), Expect = 0.48
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 295 SPQQQRRYKCGLCVKTYMYLHSLRKHMLTH 384
S + R++KC C K + + H L++H+ H
Sbjct: 17 SDEALRKFKCPECTKAFKFKHHLKEHIRIH 46
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 10 YQCQVCGKGYIESSSYKKHM 69
++CQ C K + S SY HM
Sbjct: 52 FECQQCHKRFSHSGSYSSHM 71
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 30.3 bits (65), Expect = 0.63
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 307 QRRYKCGLCVKTYMYLHSLRKHMLTH 384
+R +KC +C K + L L+KH L H
Sbjct: 533 ERPFKCEICTKEFTQLAHLQKHHLVH 558
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 4 RGYQCQVCGKGYIESSSYKKHMK 72
R Y C CGK YI S + H K
Sbjct: 618 RPYSCGTCGKKYISPSGLRTHWK 640
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 313 RYKCGLCVKTYMYLHSLRKHMLTH 384
RY C C KT+ L +L+ H+ TH
Sbjct: 507 RYACKDCNKTFGQLSNLKVHVRTH 530
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 307 QRRYKCGLCVKTYMYLHSLRKHMLT 381
+R Y CG C K Y+ LR H T
Sbjct: 617 ERPYSCGTCGKKYISPSGLRTHWKT 641
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 30.3 bits (65), Expect = 0.63
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 10 YQCQVCGKGYIESSSYKKH 66
+ C++CGKG+ ++ +YK H
Sbjct: 136 FVCEICGKGFHQNGNYKNH 154
Score = 27.1 bits (57), Expect = 5.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 10 YQCQVCGKGYIESSSYKKHMK 72
+ C VC KG+ + KKH++
Sbjct: 192 FTCHVCSKGFCRNFDLKKHLR 212
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 4 RGYQCQVCGKGYIESSSYKKH 66
R + C++CG+G+IE S +H
Sbjct: 622 RAHLCKICGRGFIEKSHLVRH 642
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 4 RGYQCQVCGKGYIESSSYKKH 66
R + C++CG+G+IE S +H
Sbjct: 622 RAHLCKICGRGFIEKSHLVRH 642
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 4 RGYQCQVCGKGYIESSSYKKH 66
R + C++CG+G+IE S +H
Sbjct: 622 RAHLCKICGRGFIEKSHLVRH 642
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 28.7 bits (61), Expect = 1.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 307 QRRYKCGLCVKTYMYLHSLRKHMLTH 384
++ Y CG C+K++ +L H+ TH
Sbjct: 325 EKPYSCGYCMKSFAQSQALTAHIRTH 350
>U39652-5|AAV28338.1| 986|Caenorhabditis elegans Hypothetical
protein R07E4.1b protein.
Length = 986
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -1
Query: 265 LGSRSLELVVRKPPLDFVARAVRPKSVNWVAVQ*DTLSHAVRRFESPRQFQSSTIPFQI 89
+ S + L + K DF+ + VRP+ + V+V+ + S A+ +F QS + F+I
Sbjct: 152 ISSLQIHLSLLKQMEDFLEKTVRPRMLQSVSVEAISHSRALIQFNYKEPQQSIILKFRI 210
>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
protein R07E4.1a protein.
Length = 1122
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -1
Query: 265 LGSRSLELVVRKPPLDFVARAVRPKSVNWVAVQ*DTLSHAVRRFESPRQFQSSTIPFQI 89
+ S + L + K DF+ + VRP+ + V+V+ + S A+ +F QS + F+I
Sbjct: 288 ISSLQIHLSLLKQMEDFLEKTVRPRMLQSVSVEAISHSRALIQFNYKEPQQSIILKFRI 346
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 186 TDFGRTARATKSSGGFRTTSSSDRDPSVAGSNPGGELPPTAAPLQVRTVRQDLHVP 353
TD + SS G R++S + + P A + +PPT P+Q V ++ P
Sbjct: 775 TDSSAGPLSIVSSAGGRSSSFTQQSPRFATTPIPSVIPPTTTPVQQIPVMMNISQP 830
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 4 RGYQCQVCGKGYIESSSYKKH 66
R Y C+ CGK + + S KKH
Sbjct: 180 RPYPCEYCGKRFHQKSDMKKH 200
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 4 RGYQCQVCGKGYIESSSYKKH 66
R Y C+ CGK + + S KKH
Sbjct: 180 RPYPCEYCGKRFHQKSDMKKH 200
>U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical
protein C10A4.8 protein.
Length = 249
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 316 YKCGLCVKTYMYLHSLRKHMLTH 384
Y CGLC K + +L HM TH
Sbjct: 224 YVCGLCDKAFNRASNLHTHMRTH 246
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 2.5
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 7 GYQCQVCGKGYIESSSYKKHMK 72
GY+C C Y+E + Y++H++
Sbjct: 111 GYRCPYCDDAYMEPAGYQQHVQ 132
>AF003142-5|ABQ13067.1| 474|Caenorhabditis elegans Hypothetical
protein F57C9.4c protein.
Length = 474
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 307 QRRYKCGLCVKTYMYLHSLRKHMLTH 384
+R Y+C C K++ +LR+H L H
Sbjct: 417 ERPYRCDTCSKSFTDASTLRRHGLVH 442
>AF003142-4|AAK73888.1| 856|Caenorhabditis elegans Hypothetical
protein F57C9.4b protein.
Length = 856
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 307 QRRYKCGLCVKTYMYLHSLRKHMLTH 384
+R Y+C C K++ +LR+H L H
Sbjct: 799 ERPYRCDTCSKSFTDASTLRRHGLVH 824
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 4 RGYQCQVCGKGYIESSSYKKHMK 72
R Y C VCGK + ++S +H+K
Sbjct: 332 RPYICNVCGKSFTKNSHVIRHLK 354
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 313 RYKCGLCVKTYMYLHSLRKHMLTHV 387
R+ C C +T+ Y L +H TH+
Sbjct: 248 RFSCDRCSRTFKYQSKLDEHRRTHL 272
>Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical
protein F43G9.11 protein.
Length = 270
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 310 RRYKCGLCVKTYMYLHSLRKHMLTH 384
R + C C K++ +LR HMLTH
Sbjct: 217 RPFSCAHCGKSFADRSNLRAHMLTH 241
>Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical
protein M163.2 protein.
Length = 500
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 304 QQRRYKCGLCVKTYMYLHSLRKHMLTH 384
+Q+ Y C +C K Y L +L+ H TH
Sbjct: 287 KQKLYCCEVCPKRYGRLENLKTHRRTH 313
>U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical
protein F47E1.3 protein.
Length = 594
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 4 RGYQCQVCGKGYIESSSYKKHMK 72
R + C VC K + +SSS KH++
Sbjct: 522 RPHVCSVCQKSFSQSSSLNKHLR 544
>AL034393-10|CAA22323.1| 228|Caenorhabditis elegans Hypothetical
protein Y18D10A.12 protein.
Length = 228
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 183 FTDFGRTARATKSSGGFRTTSSSDRDPSVAGSNPGGELPPTAAPLQVR 326
F + GR+ KS F ++SSS+ D G P PP P+Q R
Sbjct: 17 FINGGRSRGGYKSYSSFSSSSSSEEDYH-HGRPPHSPRPPRPQPVQPR 63
>AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical
protein Y5F2A.4 protein.
Length = 454
Score = 27.9 bits (59), Expect = 3.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 319 KCGLCVKTYMYLHSLRKHMLTHV 387
KC +C K + L L++H +TH+
Sbjct: 44 KCSMCDKVFPRLSHLQRHQMTHL 66
>AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein.
Length = 270
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 310 RRYKCGLCVKTYMYLHSLRKHMLTH 384
R + C C K++ +LR HMLTH
Sbjct: 217 RPFSCAHCGKSFADRSNLRAHMLTH 241
>U32305-6|AAV58892.1| 411|Caenorhabditis elegans Hypothetical
protein B0336.7b protein.
Length = 411
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 298 PQQQRRYKCGLCVKT-YMYLHSLRKHMLTHV 387
P ++ R KC LC+KT + SL H+ H+
Sbjct: 348 PSKKSRIKCHLCLKTSFSSTQSLVDHLQKHI 378
>U32305-5|AAK18855.2| 501|Caenorhabditis elegans Hypothetical
protein B0336.7a protein.
Length = 501
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 298 PQQQRRYKCGLCVKT-YMYLHSLRKHMLTHV 387
P ++ R KC LC+KT + SL H+ H+
Sbjct: 438 PSKKSRIKCHLCLKTSFSSTQSLVDHLQKHI 468
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +1
Query: 10 YQCQV--CGKGYIESSSYKKHMK 72
Y CQ+ C K Y + SS +KH+K
Sbjct: 337 YSCQIPQCTKSYTDPSSLRKHIK 359
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 304 QQRRYKCGLCVKTYMYLHSLRKHM 375
Q R++C +C K+Y LRKH+
Sbjct: 264 QSNRFECTICHKSYPVPSELRKHI 287
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 304 QQRRYKCGLCVKTYMYLHSLRKHM 375
Q R++C +C K+Y LRKH+
Sbjct: 382 QSNRFECTICHKSYPVPSELRKHI 405
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +1
Query: 10 YQCQV--CGKGYIESSSYKKHMK 72
Y CQ+ C K Y + SS +KH+K
Sbjct: 336 YSCQIPQCTKSYTDPSSLRKHIK 358
>AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila
odd-skipped-like protein2 protein.
Length = 254
Score = 27.5 bits (58), Expect = 4.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 4 RGYQCQVCGKGYIESSSYKKH 66
R ++C++CGKG+ +S + H
Sbjct: 178 RPFKCEICGKGFCQSRTLLVH 198
>Z83228-4|CAB05735.2| 318|Caenorhabditis elegans Hypothetical
protein F52F12.4 protein.
Length = 318
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 316 YKCGLCVKTYMYLHSLRKHMLTHV 387
Y C C K + +++KHM THV
Sbjct: 93 YVCPFCGKQFRLKGNMKKHMRTHV 116
>Z79759-3|CAB02136.1| 225|Caenorhabditis elegans Hypothetical
protein ZK858.3 protein.
Length = 225
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Frame = -1
Query: 205 AVRPKSVNW-------VAVQ*DTLSHAVRRFESPRQFQSSTIPFQIY*TRAFSCVSYTNS 47
++ P +NW V + ++ F+SP + +S++ F T AF + NS
Sbjct: 159 SINPSKINWLIKPFKPVVNGWSSYANCAASFQSPTEVESASYTFFYPCTMAFKSICERNS 218
Query: 46 TLCN 35
T+ N
Sbjct: 219 TILN 222
>Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical
protein R06C7.9 protein.
Length = 729
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 322 CGLCVKTYMYLHSLRKHM 375
CG+C K + L S+R+HM
Sbjct: 496 CGVCTKKFNTLSSIRRHM 513
>AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical
protein Y37E11B.1b protein.
Length = 167
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 301 QQQRRYKCGLCVKTYMYLHSLRKHMLTH 384
+ +R+ +C C K + LRKH + H
Sbjct: 36 EAERKLECSTCQKRFHNAELLRKHQIVH 63
>AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical
protein C46E10.8 protein.
Length = 172
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 10 YQCQVCGKGYIESSSYKKHMK 72
YQC+ C + Y S K H+K
Sbjct: 29 YQCKACSRIYASRKSLKSHLK 49
>AC098856-8|ABO52819.1| 384|Caenorhabditis elegans Hypothetical
protein Y37F4.6 protein.
Length = 384
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 316 YKCGLCVKTYMYLHSLRKHMLTHV 387
YKCGLC + R+H+ TH+
Sbjct: 215 YKCGLCNIQFAADQHYREHVATHI 238
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 301 QQQRRYKCGLCVKTYMYLHSLRKHMLTH 384
Q Y+C C K Y Y SL HM H
Sbjct: 351 QMVGNYECTFCNKKYPYASSLYIHMRKH 378
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 313 RYKCGLCVKTYMYLHSLRKHMLTH 384
+++CG+C K + +L+ HM TH
Sbjct: 588 KHQCGVCFKHFSSSSALQIHMRTH 611
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 240 TSSSDRDPSVAGSNPGGELPPTAA 311
TSS+ R PS AGSN E PT++
Sbjct: 85 TSSASRPPSAAGSNIFQESRPTSS 108
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 240 TSSSDRDPSVAGSNPGGELPPTAA 311
TSS+ R PS AGSN E PT++
Sbjct: 85 TSSASRPPSAAGSNIFQESRPTSS 108
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 313 RYKCGLCVKTYMYLHSLRKHMLTH 384
+++CG+C K + +L+ HM TH
Sbjct: 559 KHQCGVCFKHFSSSSALQIHMRTH 582
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 313 RYKCGLCVKTYMYLHSLRKHMLTH 384
+++CG+C K + +L+ HM TH
Sbjct: 588 KHQCGVCFKHFSSSSALQIHMRTH 611
>AL023828-25|CAD56605.1| 167|Caenorhabditis elegans Hypothetical
protein Y17G7B.22 protein.
Length = 167
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 298 PQQQRRYKCGLCVKTYMYLHSLRKHMLTHV 387
P+++ +Y C C + ++Y H L +H H+
Sbjct: 93 PRKKFKYYCDKCNERFIYEHLLYRHKEEHL 122
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 307 QRRYKCGLCVKTYMYLHSLRKHMLTH 384
+R Y C C K + +L KH+ TH
Sbjct: 219 ERPYPCAQCEKAFTDSSTLTKHLRTH 244
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 307 QRRYKCGLCVKTYMYLHSLRKHMLTH 384
+R Y C C K + +L KH+ TH
Sbjct: 160 ERPYPCAQCEKAFTDSSTLTKHLRTH 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.130 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,499,838
Number of Sequences: 27780
Number of extensions: 115578
Number of successful extensions: 836
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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