Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_B20
(418 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 42 2e-04
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 39 0.001
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 34 0.053
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 34 0.053
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 33 0.069
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 33 0.069
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 33 0.12
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 33 0.12
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 31 0.28
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 31 0.37
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 29 1.1
11_01_0711 - 5839385-5840311,5840815-5841111 29 2.0
01_05_0761 - 24984386-24984606,24984702-24984845,24986155-249863... 29 2.0
05_06_0227 + 26565169-26566380 28 2.6
12_01_1033 + 10629897-10632311,10633874-10633879 28 3.5
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 27 4.6
08_02_1498 + 27553449-27553730,27553834-27553946,27554063-275541... 27 6.0
07_03_1248 - 25165929-25166891,25169159-25169473 27 6.0
03_05_0468 - 24630701-24631399 27 6.0
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 27 6.0
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +1
Query: 160 DKRVPIDQWPDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLGRKYGLAGADL 315
D R + P + PFGQ+PVL+ + +S I+RY+ KY GADL
Sbjct: 39 DLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGADL 90
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 39.1 bits (87), Expect = 0.001
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +1
Query: 187 PDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLGRKY-----GLA-GADLEEDFEID 336
P+ ++ PFG++PVLE QS I+RY+ RKY GL G LEE +D
Sbjct: 44 PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMVD 99
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 33.9 bits (74), Expect = 0.053
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 187 PDMKSKTPFGQLPVLEIDGKQFT-QSTGISRYLGRKYG---LAGADLEEDFEIDQNVEF- 351
PD ++ PFGQ+P L+ DG F +S I +Y+ RK L DL+E +D +E
Sbjct: 44 PDHLARNPFGQVPALQ-DGDLFLWESRAICKYVCRKNKPELLKDGDLKESAMVDVWLEVE 102
Query: 352 LNDIRATAGPIYYE 393
N PI ++
Sbjct: 103 SNQYTPALNPILFQ 116
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 33.9 bits (74), Expect = 0.053
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 187 PDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLGRKYG---LAGADLEEDFEID 336
P S+ PFGQ+P E +S IS+Y+ RK+G L ++L E +D
Sbjct: 44 PPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVD 96
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 33.5 bits (73), Expect = 0.069
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 187 PDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLGRKYGLAGADL 315
P+ + PFGQ+P + +S I +Y+ RKY ADL
Sbjct: 44 PEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADL 86
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 33.5 bits (73), Expect = 0.069
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 187 PDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLGRKYGLAGADLEEDFEI 333
P+ + PFG++P L+ +S I++Y+ RKY + DL + +I
Sbjct: 44 PEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDI 92
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 32.7 bits (71), Expect = 0.12
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 187 PDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLGR---KYGLAGADLEEDFEIDQNVEF-L 354
P+ P G++PVLE +S I+RY+ R L G+ L + I+Q ++F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSA 126
Query: 355 NDIRATAGPIYYEK 396
++ A G Y +
Sbjct: 127 TEVDANIGRWLYPR 140
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 32.7 bits (71), Expect = 0.12
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 187 PDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLGRKYGLAGADL 315
P+ + PFGQ+P + +S + RY+ RKY + A+L
Sbjct: 44 PEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANL 86
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 31.5 bits (68), Expect = 0.28
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +1
Query: 133 LAYGGQEFEDKRVPID------QWPDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLGRK 291
L G+++E VPID + P+ S+ PFGQ+P L+ +S IS+Y+ RK
Sbjct: 21 LEEAGEQYEV--VPIDFSIAEHKSPEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK 77
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 31.1 bits (67), Expect = 0.37
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 187 PDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLGRKY 294
PD ++ PFGQ+P + +S I RY+ RK+
Sbjct: 44 PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKH 79
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +1
Query: 199 SKTPFGQLPVLEIDGKQFTQSTGISRYLGRKYG----LAGADLEEDFEIDQNVE 348
+++PFG++P E +S I RY+ R Y L +LEE +D +E
Sbjct: 47 ARSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEESAMVDMWME 100
>11_01_0711 - 5839385-5840311,5840815-5841111
Length = 407
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = +1
Query: 31 KRLCVSNIQQKLTMPNVVFYYFPLKGLGESQRMLLAYGGQEFED 162
KR+ +S++ +++T V+ + + G+G++ L + F D
Sbjct: 172 KRIIISSLSKRMTEETVILPIYGIGGIGKTTLAKLVFNASNFRD 215
>01_05_0761 -
24984386-24984606,24984702-24984845,24986155-24986393,
24986601-24986704,24987046-24987120,24987257-24987304,
24988836-24988880
Length = 291
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 250 FTQSTGISRYLGRKYGLAGADLEEDFEIDQNVEFLNDIRA-TAGPIYYEK 396
F Q G Y R YG A + + DF + F+N R TAG ++EK
Sbjct: 53 FIQELGPGSYKSRVYGRALSGGDVDFRTRVLLAFINCARGRTAGAAHHEK 102
>05_06_0227 + 26565169-26566380
Length = 403
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 399 VFLVIDGASGCTNIVKELHVLINLEVFL*VCTSESV-LATEVPADAGALSKLLTV 238
+FL IDG G + + HVL+NL F + ++ L ++P +A L ++ V
Sbjct: 102 LFLAIDGPQGDQAVQAQDHVLVNLNNFQYLDLPNAIPLNWDLPPEAQDLERIAIV 156
>12_01_1033 + 10629897-10632311,10633874-10633879
Length = 806
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 163 KRVPIDQW---PDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLGRKYGLAGADL 315
+RV +D + PD ++T L V DG++ +S + R+L Y G D+
Sbjct: 149 RRVLMDSYAGLPDYAARTCLLYLAVFPNDGRRLKRSVLVRRWLAEGYARGGEDV 202
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 187 PDMKSKTPFGQLPVLEI-DGKQFTQSTGISRYL 282
P+ P G++PVLE DG F +S I+RY+
Sbjct: 43 PEFLKMNPIGKIPVLETPDGPVF-ESNAIARYV 74
>08_02_1498 +
27553449-27553730,27553834-27553946,27554063-27554129,
27554310-27554402,27554516-27554659,27554860-27554954,
27555120-27555412,27555514-27555632,27555742-27556094,
27556177-27556286,27556403-27556512,27556802-27557671
Length = 882
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 166 RVPIDQWPDMKSKTPFGQLPVLE 234
R P D WPD+ SK G L V+E
Sbjct: 58 RSPPDTWPDLISKAKEGGLNVIE 80
>07_03_1248 - 25165929-25166891,25169159-25169473
Length = 425
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = +1
Query: 217 QLPVLEIDGKQFTQSTGISRYLGRKYGLAGADLEEDFEIDQNVEFLNDIRATAGPIYYEK 396
QL ++ DG + S Y+ G +D ++QN F++ + T I K
Sbjct: 213 QLEKIKDDGSNDNADSSHSNYVQDSSGSVSLQHHQDMSLNQNHLFVHQVELTLDQIEEIK 272
Query: 397 DEAMKE 414
D+ +
Sbjct: 273 DDGSND 278
>03_05_0468 - 24630701-24631399
Length = 232
Score = 27.1 bits (57), Expect = 6.0
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 GESQRMLLAYGGQEFEDK--RVPIDQWPDMKSKTPFGQLPVLEIDGKQFTQSTGISRYLG 285
G R+ LA G +E+K + + S GQ+PVL + GK +S I ++
Sbjct: 19 GNRVRIALARKGVAYEEKPENLAAKSALLLSSNPVHGQVPVLLVGGKPVCESLVILEFID 78
Query: 286 RKYGLAGADL 315
++ G L
Sbjct: 79 EEFAGVGEPL 88
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +1
Query: 115 ESQRMLLAYGGQEFEDKRVPIDQW------PDMKSKTPFGQLPVLEIDGKQFTQSTGISR 276
E R+L+ ++ E + V +D + P P G+ E D ++S GI R
Sbjct: 16 EVARVLMCLFEKDVEFQLVRVDAYRGTQRMPQYLKLQPLGEALTFEDDNLTLSESRGILR 75
Query: 277 YLGRKYGLAG 306
++ KY G
Sbjct: 76 HIAHKYARQG 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.138 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,400,010
Number of Sequences: 37544
Number of extensions: 200812
Number of successful extensions: 599
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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