Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_B18
(459 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 127 4e-30
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 125 1e-29
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 125 2e-29
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 123 8e-29
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 117 5e-27
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 107 6e-24
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 97 8e-21
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 81 6e-16
08_02_1528 + 27666356-27667081 31 0.45
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322... 29 1.8
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 29 2.4
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 28 3.1
02_01_0167 - 1159231-1159263,1159348-1159419,1159957-1160052,116... 28 3.1
11_06_0284 + 21909758-21913645 28 4.2
04_01_0275 + 3648866-3649951 27 5.5
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 27 5.5
03_05_0615 + 26137785-26138593,26139307-26141368 27 7.3
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486... 27 9.6
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 127 bits (307), Expect = 4e-30
Identities = 67/116 (57%), Positives = 85/116 (73%), Gaps = 4/116 (3%)
Frame = +3
Query: 123 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 296
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 297 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIP 458
ARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVP 335
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 125 bits (302), Expect = 1e-29
Identities = 65/116 (56%), Positives = 86/116 (74%), Gaps = 4/116 (3%)
Frame = +3
Query: 123 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 296
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 297 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIP 458
ARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVP 117
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 125 bits (301), Expect = 2e-29
Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 4/111 (3%)
Frame = +3
Query: 138 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 311
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 312 WRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIP 458
WR++SSIEQK E G+E + KEYR K+E EL +IC +L LLD HL+P
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVP 111
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 123 bits (296), Expect = 8e-29
Identities = 66/115 (57%), Positives = 82/115 (71%), Gaps = 4/115 (3%)
Frame = +3
Query: 126 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 299
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 300 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIP 458
RR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVP 116
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 117 bits (281), Expect = 5e-27
Identities = 62/112 (55%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
Frame = +3
Query: 144 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 308
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 309 SWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIP 458
SWR++SSIEQK E G+ A+ YR +VE EL IC +L LLD+ L+P
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVP 121
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 107 bits (256), Expect = 6e-24
Identities = 49/106 (46%), Positives = 71/106 (66%)
Frame = +3
Query: 141 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 320
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 321 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIP 458
+ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLP 108
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 96.7 bits (230), Expect = 8e-21
Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Frame = +3
Query: 234 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 407
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 408 REICYDVLCLLDKHLIP 458
IC +L LLD HL+P
Sbjct: 78 ARICDGILALLDSHLVP 94
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 80.6 bits (190), Expect = 6e-16
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +3
Query: 201 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 374
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 375 KEYRVKVEKELREICYDVLCLLDK 446
EYR KVE E+ +IC DV+ ++DK
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK 84
>08_02_1528 + 27666356-27667081
Length = 241
Score = 31.1 bits (67), Expect = 0.45
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +3
Query: 111 QYLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNV 290
QY T V K+ K A + + + E E + + +LLS K +
Sbjct: 124 QYFIRLTKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKI 180
Query: 291 VGARRSSWRVISSIEQKTE-GSERKQQMAKEYRV 389
+ S W ++S QKT + +Q A E+ +
Sbjct: 181 TTSNSSKWSLVSKAFQKTRLACQEEQLQALEFAI 214
>11_01_0419 +
3226224-3226756,3228010-3228169,3228256-3228435,
3228525-3228659,3229262-3229344,3229442-3229535,
3229649-3229735
Length = 423
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 203 GGRDEGSDGNRRRAQQ-RRKKPSFRCL*KCGRRPTVIM 313
G E +DG RRR++Q RR++P R + G RP++ M
Sbjct: 91 GSAAEAADGGRRRSRQGRRRRPQRRR--RRGSRPSLFM 126
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 358 LSDPSVFCSIEEMTRHDDRRAPTTFL*ATERR 263
L+D S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.3 bits (60), Expect = 3.1
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 138 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 299
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 300 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 392
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
>02_01_0167 -
1159231-1159263,1159348-1159419,1159957-1160052,
1160248-1160358,1160768-1160800,1160963-1161076
Length = 152
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 KETFFPLLIKMWSAPDGHH-GESFPLLNRKPKGRKENNRWQ 375
+E PLL+++++ GHH E F + ++PK + W+
Sbjct: 36 REKTCPLLLRVFTKVGGHHQNEEFAVRGKEPKDEVQIYTWK 76
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 27.9 bits (59), Expect = 4.2
Identities = 20/88 (22%), Positives = 41/88 (46%)
Frame = +3
Query: 150 ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISS 329
+L + + E+ + ++ ++E+T+ G E EE+N G + +
Sbjct: 403 KLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEEG-KEKELKGRKD 461
Query: 330 IEQKTEGSERKQQMAKEYRVKVEKELRE 413
E+K +G R+++ +E+ K EKE E
Sbjct: 462 KEKKEKGG-REERKEEEHHEKQEKEKEE 488
>04_01_0275 + 3648866-3649951
Length = 361
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 303 RSSWRVISSIEQKTEGSERKQQMAKEYR--VKVEKELREICYDVL 431
R SW +ISS+ +K E + Y ++V ++R++ +D +
Sbjct: 19 RRSWMLISSLGKKLASEEEWMEYEYHYSRGIRVSPDIRKVLFDCI 63
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 174 AEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR---RSSWRVISSIEQKT 344
A AE ++ A KE+ +E+ + + A +++V + +SS R I ++++
Sbjct: 129 ARYAEVVQELDQAKKELLRLRLEVRSAAE-AKAKAERDIVASACTIQSSLRAIDEMKRRV 187
Query: 345 EGSERKQQMAKEYRVKVEKELREI 416
+ + + + + R++ E+E REI
Sbjct: 188 DEANEEHVLVELARIEAERERREI 211
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 165 AKLAEQAE-RYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWR 317
+KLA AE +Y D+ +E+T ELS+ LL +A + ++ WR
Sbjct: 13 SKLATLAEQKYGDVRRIRREITFLTDELSSMNALLLKLADMEELDSQLKEWR 64
>03_05_0944 + 29046793-29046922,29048091-29048464,29048556-29048687,
29048829-29049210,29049370-29049513,29049593-29049777,
29049925-29050051,29050603-29050676,29051071-29051147,
29051256-29051292,29051453-29051619,29051800-29051983,
29052053-29052130,29052451-29052570,29052648-29052707,
29053057-29053179,29053848-29053941,29054019-29054197,
29054737-29055039,29055373-29055474,29055553-29055693,
29055831-29055995,29056168-29056344,29056432-29056554,
29057787-29057867,29057983-29058099,29058214-29058386,
29058846-29058923,29058994-29059141,29059755-29059877,
29060015-29060071,29060145-29060255,29060382-29060573,
29060690-29060863,29061263-29061373,29061462-29061531,
29061734-29061812,29061898-29062000,29062086-29062256,
29062348-29062470,29062548-29062661,29062935-29063041,
29063117-29063168,29063245-29063351,29063589-29063703,
29063819-29063929,29064016-29064153,29064230-29064352,
29064535-29064606,29064774-29064886,29066780-29067110,
29067199-29067381,29068669-29068863,29068943-29069110,
29069208-29069340,29069511-29069595,29069726-29069765
Length = 2591
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 268 FPLLIKMWSAPDGHHGESFPLLNRKPKGRKENNRWQKNIGLK*KRSSEKSAMMSCV 435
FP+L + S +H P+LN G K N+ Q +G+ K + A ++ +
Sbjct: 989 FPVLYHVLSTVPAYHPSVGPMLNELCLGLKSNDLAQALVGVYAKEVHVRLACLTAI 1044
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,221,708
Number of Sequences: 37544
Number of extensions: 235697
Number of successful extensions: 787
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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