Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_B18
         (459 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical pr...   190   3e-49
Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...   190   3e-49
Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...   183   5e-47
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...   183   5e-47
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr...    33   0.100
AF039713-2|AAB96726.2|  476|Caenorhabditis elegans Hypothetical ...    30   0.93 
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical...    29   1.2  
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical...    29   1.2  
AL032630-13|CAA21568.1|  348|Caenorhabditis elegans Hypothetical...    29   2.1  
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z47357-2|CAD54175.1|  464|Caenorhabditis elegans Hypothetical pr...    28   3.8  
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical...    28   3.8  
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    27   6.6  
AF022980-4|AAG24191.1|  335|Caenorhabditis elegans Serpentine re...    27   6.6  
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF016670-8|AAB66101.1|  783|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical
           protein F52D10.3b protein.
          Length = 198

 Score =  190 bits (464), Expect = 3e-49
 Identities = 96/109 (88%), Positives = 100/109 (91%)
 Frame = +3

Query: 132 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 311
           MS  KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1   MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60

Query: 312 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIP 458
           WRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL LLDK LIP
Sbjct: 61  WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIP 109


>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score =  190 bits (464), Expect = 3e-49
 Identities = 96/109 (88%), Positives = 100/109 (91%)
 Frame = +3

Query: 132 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 311
           MS  KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1   MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60

Query: 312 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIP 458
           WRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL LLDK LIP
Sbjct: 61  WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIP 109


>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score =  183 bits (446), Expect = 5e-47
 Identities = 93/108 (86%), Positives = 99/108 (91%)
 Frame = +3

Query: 132 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 311
           MS   EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1   MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60

Query: 312 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLI 455
           WRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL LLD+ LI
Sbjct: 61  WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLI 108


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score =  183 bits (446), Expect = 5e-47
 Identities = 93/108 (86%), Positives = 99/108 (91%)
 Frame = +3

Query: 132 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 311
           MS   EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1   MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60

Query: 312 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLI 455
           WRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL LLD+ LI
Sbjct: 61  WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLI 108


>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical
           protein F20D12.2 protein.
          Length = 1116

 Score = 33.1 bits (72), Expect = 0.100
 Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
 Frame = +3

Query: 117 LPSSTMSVDKEEL-VQRAKLAEQAERYDDMAAAMKEVTETGVE-LSNEERNLLSVAYKNV 290
           LP      ++E++ V+R K  E A R   +   M  V +  +  ++NEE     +  K +
Sbjct: 679 LPMQASMENREKMEVERLKRLELATREKLIQKLMTGVIDQVIHGIANEETMKAKIVRKQM 738

Query: 291 VG---ARR-SSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELRE 413
           +    AR+    +V    E+K +  E+++ +AKE  +KVEKE+ E
Sbjct: 739 LAIENARKLKEEQVRLENEKKLKRIEQEKNIAKELVLKVEKEISE 783


>AF039713-2|AAB96726.2|  476|Caenorhabditis elegans Hypothetical
           protein F57B10.9 protein.
          Length = 476

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
 Frame = +3

Query: 120 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKN--VV 293
           P+ T+++     ++R +L E+           KE  E   ELS EE+N +S    N  + 
Sbjct: 206 PNMTVAILLSSDIER-RLIEELHIVLREFTDFKEQAEPSTELSKEEKNRISTTISNFLIK 264

Query: 294 GARRSSW-------RVISSIEQKTE 347
           G ++ +W       RVIS +E   E
Sbjct: 265 GGQKIAWGVETTTVRVISRVEDNGE 289


>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
            protein Y39B6A.30 protein.
          Length = 1408

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 21/88 (23%), Positives = 39/88 (44%)
 Frame = +3

Query: 141  DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 320
            + E+L+   K  E  +  ++   A +E  +   E    E   + V  K  V A     +V
Sbjct: 895  ENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVE-KEKVKAEEEKVKV 953

Query: 321  ISSIEQKTEGSERKQQMAKEYRVKVEKE 404
                 ++   +E ++  A+E +VK+EKE
Sbjct: 954  EKERNKEKVKAEEERLKAEEEKVKIEKE 981


>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
            protein Y111B2A.14 protein.
          Length = 1481

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 23/83 (27%), Positives = 44/83 (53%)
 Frame = +3

Query: 168  KLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE 347
            K  EQ +   + A  +K++ E   +L  E+      A K+ + A++   R+    ++K E
Sbjct: 954  KALEQRKAKKEEAERLKKLEE---KLKKEKEKQ---AEKDRIEAKKFEERMKKE-QEKQE 1006

Query: 348  GSERKQQMAKEYRVKVEKELREI 416
              ERK++  +E + + E+E+REI
Sbjct: 1007 EKERKEREKREEKERKEREIREI 1029


>AL032630-13|CAA21568.1|  348|Caenorhabditis elegans Hypothetical
           protein Y62H9A.13 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +3

Query: 228 ETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVE 398
           +  VELSN+  N   + Y   V +  ++    +S E+KT  +E +  +  EY VK E
Sbjct: 97  DVDVELSNDVSNENPIVYYQKVASSTTNPVYNNSSEEKTHSAENQDNI--EYGVKTE 151


>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
 Frame = +3

Query: 144 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 323
           K  LVQR + A   E+  + + A ++V         E R+    A K   G    +  + 
Sbjct: 683 KTLLVQRLQTALDTEKAAEASVAARDV---------EMRDAAENAVKQEGGEENPAAFIA 733

Query: 324 SSIEQ---KTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKH 449
            SIE+   KTE   +K+    E R K E++L +   +    L+KH
Sbjct: 734 PSIEETKAKTEAEAKKEAEEAEKRKKKEEQLEKEKKEKREALEKH 778


>Z47357-2|CAD54175.1|  464|Caenorhabditis elegans Hypothetical
           protein ZK1128.2b protein.
          Length = 464

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 282 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 380
           KNV+GAR+ +W+ I+     T+G E+  ++A E
Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHE 127


>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
 Frame = +3

Query: 144 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 323
           K  LVQR + A   E+  + + A ++V         E R+    A K   G    +  + 
Sbjct: 683 KTLLVQRLQTALDTEKAAEASVAARDV---------EMRDAAENAVKQEGGEENPAAFIA 733

Query: 324 SSIEQ---KTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKH 449
            SIE+   KTE   +K+    E R K E++L +   +    L+KH
Sbjct: 734 PSIEETKAKTEAEAKKEAEEAEKRKKKEEQLEKEKKEKREALEKH 778


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
            protein F55F10.1 protein.
          Length = 4368

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 19/80 (23%), Positives = 38/80 (47%)
 Frame = +3

Query: 141  DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 320
            D+E++ ++ +LA      ++      E  ETG ++ N E +   +  K  +   R + R 
Sbjct: 3947 DEEKVERKRELATDDAPMEEAEMGDGEENETGQQMENAEISDRQMVGKGTIEEARQTKR- 4005

Query: 321  ISSIEQKTEGSERKQQMAKE 380
                E+K E  +RK++  K+
Sbjct: 4006 ----EEKREEEKRKRRELKD 4021


>AF022980-4|AAG24191.1|  335|Caenorhabditis elegans Serpentine
           receptor, class j protein50 protein.
          Length = 335

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 407 ELLFYFNPIFFCHLLFSFRPF 345
           ++++YF P  FC L F   PF
Sbjct: 4   DIIYYFTPRVFCALTFLVNPF 24


>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical
           protein K07G5.3 protein.
          Length = 1202

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +3

Query: 240 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKE 404
           EL  E+R     AY++ + +RR S    +++ +K    +R+Q+  ++Y   V +E
Sbjct: 606 ELREEDRAQKRFAYRSAIDSRRISALQFANLARK-RVMDRRQRKERKYEEIVREE 659


>AF016670-8|AAB66101.1|  783|Caenorhabditis elegans Hypothetical
           protein K02F6.1 protein.
          Length = 783

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +3

Query: 225 TETGVELSNEERNLLSVA 278
           TE G ELSN ERN + VA
Sbjct: 119 TEDGAELSNRERNRMLVA 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,399,818
Number of Sequences: 27780
Number of extensions: 200386
Number of successful extensions: 694
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)