Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_B17
         (381 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            33   0.004
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            30   0.033
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   2.2  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   2.2  
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    24   2.2  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   3.8  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   6.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   8.7  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 33.1 bits (72), Expect = 0.004
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 7/51 (13%)
 Frame = +2

Query: 134  SEIEKQFVEIKKQVQENFK-PDN------VKKQFNNMVDDFNKFMSSMNPN 265
            S+I+KQF ++K+ VQE  +  DN      +   F ++ +DFN F+S++NP+
Sbjct: 3199 SQIDKQFHDLKQTVQEYRQLADNRNSGNWLDNIFKDIKEDFNVFLSTVNPS 3249


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 29.9 bits (64), Expect = 0.033
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 7/49 (14%)
 Frame = +2

Query: 134  SEIEKQFVEIKKQVQENFK-PDN------VKKQFNNMVDDFNKFMSSMN 259
            S+I+KQF ++K+ VQE  +  DN      +   F ++ +DFN F+S++N
Sbjct: 3196 SQIDKQFHDLKQTVQEYRQLADNRNSGNWLDNIFKDIEEDFNVFLSTVN 3244


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 89  FVKRDAEAASTGNAFSEIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDF 235
           F+     AA +  A + IE+  V++  QVQ   K   V KQ+  +VD F
Sbjct: 14  FLAGGISAAVSKTAVAPIER--VKLLLQVQAASKQIAVDKQYKGIVDCF 60


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 89  FVKRDAEAASTGNAFSEIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDF 235
           F+     AA +  A + IE+  V++  QVQ   K   V KQ+  +VD F
Sbjct: 14  FLAGGISAAVSKTAVAPIER--VKLLLQVQAASKQIAVDKQYKGIVDCF 60


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 89  FVKRDAEAASTGNAFSEIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDF 235
           F+     AA +  A + IE+  V++  QVQ   K   V KQ+  +VD F
Sbjct: 14  FLAGGISAAVSKTAVAPIER--VKLLLQVQAASKQIAVDKQYKGIVDCF 60


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 56  FLAVCFISVHAFVKRDAEAASTGNAF 133
           F+  C  S  AFVKR+ +A    ++F
Sbjct: 350 FIGNCISSYSAFVKRERDANGFPSSF 375


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 11/52 (21%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +2

Query: 110  AASTGNAF---SEIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDFNKFMSSM 256
            AA  G+A+   S IE  + +++  ++    PD +KK  +++  +    + ++
Sbjct: 966  AADGGSAYERESRIEIDYSKLEHHLKNLSDPDQIKKSGDSLAKELQSKLDTL 1017


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -1

Query: 177  CTCFLISTNCFSISLNALP 121
            C  F IST CF   L  LP
Sbjct: 1028 CFDFDISTQCFKERLRLLP 1046


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,712
Number of Sequences: 2352
Number of extensions: 4645
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)