BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_B15
(402 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-28|CAB61106.1| 209|Caenorhabditis elegans Hypothetical... 46 1e-05
AL132949-25|CAB61103.1| 209|Caenorhabditis elegans Hypothetical... 45 2e-05
AL132949-29|CAB61107.1| 209|Caenorhabditis elegans Hypothetical... 43 7e-05
AL132949-27|CAB61105.1| 209|Caenorhabditis elegans Hypothetical... 42 1e-04
Z50859-1|CAA90726.1| 208|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AL132949-32|CAB97240.2| 209|Caenorhabditis elegans Hypothetical... 40 5e-04
AC087794-12|AAG53708.1| 209|Caenorhabditis elegans Glutathione ... 40 5e-04
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 39 0.001
AL132949-30|CAB61109.1| 210|Caenorhabditis elegans Hypothetical... 37 0.005
Z80217-4|CAB02290.1| 213|Caenorhabditis elegans Hypothetical pr... 36 0.008
Z80217-1|CAB02295.1| 209|Caenorhabditis elegans Hypothetical pr... 36 0.008
Z80217-2|CAB02288.1| 209|Caenorhabditis elegans Hypothetical pr... 35 0.019
Z68879-6|CAA93086.1| 207|Caenorhabditis elegans Hypothetical pr... 34 0.044
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 34 0.044
U29380-3|AAA68744.1| 213|Caenorhabditis elegans Glutathione s-t... 34 0.044
AF010239-1|AAB65417.1| 207|Caenorhabditis elegans glutathione S... 34 0.044
AC119287-2|AAM19064.2| 218|Caenorhabditis elegans Glutathione s... 34 0.044
Z80217-8|CAB02294.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.077
Z93393-18|CAB07700.3| 207|Caenorhabditis elegans Hypothetical p... 33 0.10
Z80217-9|CAB02297.3| 207|Caenorhabditis elegans Hypothetical pr... 33 0.10
Z80217-3|CAB02289.1| 210|Caenorhabditis elegans Hypothetical pr... 33 0.10
AC119287-1|AAO38568.1| 218|Caenorhabditis elegans Glutathione s... 32 0.18
Z80217-5|CAB02291.1| 208|Caenorhabditis elegans Hypothetical pr... 31 0.23
AL132949-26|CAB61104.1| 209|Caenorhabditis elegans Hypothetical... 31 0.23
Z93379-1|CAB07589.1| 218|Caenorhabditis elegans Hypothetical pr... 29 0.94
Z68879-5|CAA93087.2| 188|Caenorhabditis elegans Hypothetical pr... 29 0.94
AF010240-1|AAB65418.1| 188|Caenorhabditis elegans glutathione S... 29 0.94
U28928-9|AAN63431.1| 471|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical pr... 27 5.0
AL032648-4|CAA21700.1| 257|Caenorhabditis elegans Hypothetical ... 27 6.7
>AL132949-28|CAB61106.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.32 protein.
Length = 209
Score = 46.0 bits (104), Expect = 1e-05
Identities = 28/74 (37%), Positives = 38/74 (51%)
Frame = +1
Query: 166 HGEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 345
HG+ + +P VP L DG I +S AII YL NK+G E A A A+VD
Sbjct: 36 HGDGTWEKLKDKTPFGQVPVLYVDGFEIPQSAAIIRYLANKFGYAGKTPEEQAWADAIVD 95
Query: 346 QRLYFDIGTLYQRF 387
Q + D +L++ F
Sbjct: 96 Q--FKDFMSLFREF 107
>AL132949-25|CAB61103.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.29 protein.
Length = 209
Score = 44.8 bits (101), Expect = 2e-05
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +1
Query: 166 HGEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 345
HG+ + + +P VP L DG I +S AII YL NK+G E A A A+VD
Sbjct: 36 HGDGTWEKLKEKTPLGQVPVLSVDGFEIPQSAAIIRYLANKFGYAGKTPEEQAWADAIVD 95
Query: 346 Q 348
Q
Sbjct: 96 Q 96
>AL132949-29|CAB61107.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.33 protein.
Length = 209
Score = 43.2 bits (97), Expect = 7e-05
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +1
Query: 166 HGEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 345
HG+ + +P VP L DG I +S AII YL NK+G E A A A+VD
Sbjct: 36 HGDGSWEKIKDKTPFGQVPVLSVDGFDIPQSAAIIRYLANKFGYAGKTPEEQAWADAIVD 95
Query: 346 Q 348
Q
Sbjct: 96 Q 96
>AL132949-27|CAB61105.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.31 protein.
Length = 209
Score = 42.3 bits (95), Expect = 1e-04
Identities = 28/78 (35%), Positives = 38/78 (48%)
Frame = +1
Query: 166 HGEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 345
HG+ + +P VP L DG I +S AII YL NK+G E A A+VD
Sbjct: 36 HGDGTWEKLKDGAPFGQVPYLTVDGFDIPQSAAIIRYLANKFGYAGKTPEEQVWADAIVD 95
Query: 346 QRLYFDIGTLYQRFGDYF 399
Q F +G+ +R +F
Sbjct: 96 QFKDF-MGSFRERIMAHF 112
>Z50859-1|CAA90726.1| 208|Caenorhabditis elegans Hypothetical
protein T26C5.1 protein.
Length = 208
Score = 40.7 bits (91), Expect = 4e-04
Identities = 29/77 (37%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 181 KPEFLKLS---PQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQR 351
KP FL+ P VP L DG I +S AI YL K+G E A A VDQ
Sbjct: 36 KPHFLEKKETYPFKQVPVLSVDGFQIPQSMAIARYLAKKFGFAGKTAEESAMVDAFVDQF 95
Query: 352 LYFDIGTLYQRFGDYFY 402
F Y DY+Y
Sbjct: 96 KDF-----YSEIRDYYY 107
>AL132949-32|CAB97240.2| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.37 protein.
Length = 209
Score = 40.3 bits (90), Expect = 5e-04
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
+P VP L DG I +S AII YL NK+G E A A A+ DQ
Sbjct: 48 TPFGQVPVLTVDGFDIPQSSAIIRYLANKFGYAGKTPEEQAWADAICDQ 96
>AC087794-12|AAG53708.1| 209|Caenorhabditis elegans Glutathione
s-transferase protein37 protein.
Length = 209
Score = 40.3 bits (90), Expect = 5e-04
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = +1
Query: 166 HGEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 345
HG+ + +P VP L DGL I +S AII YL NK+G E A A+ D
Sbjct: 36 HGDGTWEKLKDKTPFGKVPFLTVDGLEIPQSHAIIRYLGNKFGYAGQTPEEKAWVDAICD 95
Query: 346 Q 348
Q
Sbjct: 96 Q 96
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 187 EFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKY 291
EF+K +P VPTLV +GLS+ ES AII YL Y
Sbjct: 46 EFVKHNPAKKVPTLVINGLSLTESLAIIEYLDEAY 80
>AL132949-30|CAB61109.1| 210|Caenorhabditis elegans Hypothetical
protein Y53F4B.35 protein.
Length = 210
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +1
Query: 166 HGEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 345
HG+ + +P VP L +G I +S AII YL K+G E A A A+ D
Sbjct: 36 HGDGTWEQIKDKTPFGQVPVLNINGFEIPQSTAIIRYLATKFGYAGKTPEEQAWADAICD 95
Query: 346 Q 348
Q
Sbjct: 96 Q 96
>Z80217-4|CAB02290.1| 213|Caenorhabditis elegans Hypothetical
protein F37B1.4 protein.
Length = 213
Score = 36.3 bits (80), Expect = 0.008
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYFDI 366
+P +P L DG I +S AI YL K+G E+A A A+VDQ F +
Sbjct: 50 TPFGQLPVLNVDGFDIPQSAAICRYLAKKFGYAGKTPEEEAWADAVVDQFKDFSV 104
>Z80217-1|CAB02295.1| 209|Caenorhabditis elegans Hypothetical
protein F37B1.1 protein.
Length = 209
Score = 36.3 bits (80), Expect = 0.008
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 172 EHLKPEFLKLSPQHT---VPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALV 342
E+ PE+ L P+ +P L DG I +S AI+ YL K+G E+A A+V
Sbjct: 35 ENGTPEWGALKPKTPFGQLPFLSVDGFEIPQSAAILRYLAKKFGYAGKTSEEEAWVDAIV 94
Query: 343 DQ 348
DQ
Sbjct: 95 DQ 96
>Z80217-2|CAB02288.1| 209|Caenorhabditis elegans Hypothetical
protein F37B1.2 protein.
Length = 209
Score = 35.1 bits (77), Expect = 0.019
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
+P +P L DG I +S AI YL K+G E+A A+VDQ
Sbjct: 48 TPMGQMPVLNVDGFEIPQSAAITRYLARKFGFAGKTPEEEAWVDAVVDQ 96
>Z68879-6|CAA93086.1| 207|Caenorhabditis elegans Hypothetical
protein K08F4.7 protein.
Length = 207
Score = 33.9 bits (74), Expect = 0.044
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYFDIGTLYQ 381
+P +P L DG +S +I YL K+G E+A A ++VDQ Y D ++
Sbjct: 46 TPFGQLPILQVDGEQFGQSMSITRYLARKFGLAGKTAEEEAYADSIVDQ--YRDFIFFFR 103
Query: 382 RF-GDYFY 402
+F FY
Sbjct: 104 QFTSSVFY 111
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 33.9 bits (74), Expect = 0.044
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +1
Query: 172 EHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARA 336
E K + +++P VPT V DG I ES AII YL + L P+D RA
Sbjct: 41 EEAKSKLKEINPAAKVPTFVVDGQVITESLAIIEYLEETH-PDVPLLPKDPIKRA 94
>U29380-3|AAA68744.1| 213|Caenorhabditis elegans Glutathione
s-transferase protein30 protein.
Length = 213
Score = 33.9 bits (74), Expect = 0.044
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 184 PEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
P P T+P L DG + +S AI +L ++G E+A+ A+ DQ
Sbjct: 40 PALKSTMPFGTLPVLYQDGKPLGQSHAISRFLARQFGINGRCPWEEAQVNAIADQ 94
>AF010239-1|AAB65417.1| 207|Caenorhabditis elegans glutathione
S-transferase protein.
Length = 207
Score = 33.9 bits (74), Expect = 0.044
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYFDIGTLYQ 381
+P +P L DG +S +I YL K+G E+A A ++VDQ Y D ++
Sbjct: 46 TPFGQLPILQVDGEQFGQSMSITRYLARKFGLAGKTAEEEAYADSIVDQ--YRDFIFFFR 103
Query: 382 RF-GDYFY 402
+F FY
Sbjct: 104 QFTSSVFY 111
>AC119287-2|AAM19064.2| 218|Caenorhabditis elegans Glutathione
s-transferase protein35 protein.
Length = 218
Score = 33.9 bits (74), Expect = 0.044
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
+P P L DG I +S AI YL K+G E+A A ++VDQ
Sbjct: 55 TPFGRFPILEFDGFKIAQSAAIQRYLARKFGFAGKTPEEEAYADSIVDQ 103
>Z80217-8|CAB02294.1| 207|Caenorhabditis elegans Hypothetical
protein F37B1.8 protein.
Length = 207
Score = 33.1 bits (72), Expect = 0.077
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
SP +P L DGL I +S AI+ YL K+G + A A+VD+
Sbjct: 46 SPMGQLPILGVDGLEIPQSAAILRYLALKFGFAGKTPEDRAWVDAVVDR 94
>Z93393-18|CAB07700.3| 207|Caenorhabditis elegans Hypothetical
protein Y48E1B.10 protein.
Length = 207
Score = 32.7 bits (71), Expect = 0.10
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 205 PQHTVPTL-VDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
P +P L + GL I +S AI YL K+G E A A AL+DQ
Sbjct: 47 PFGQMPVLELSSGLQIPQSMAIARYLAKKFGYAGKTDEEAALADALIDQ 95
>Z80217-9|CAB02297.3| 207|Caenorhabditis elegans Hypothetical
protein Y48E1B.10 protein.
Length = 207
Score = 32.7 bits (71), Expect = 0.10
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 205 PQHTVPTL-VDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
P +P L + GL I +S AI YL K+G E A A AL+DQ
Sbjct: 47 PFGQMPVLELSSGLQIPQSMAIARYLAKKFGYAGKTDEEAALADALIDQ 95
>Z80217-3|CAB02289.1| 210|Caenorhabditis elegans Hypothetical
protein F37B1.3 protein.
Length = 210
Score = 32.7 bits (71), Expect = 0.10
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
+P +P L D I +S AI YL K+G E+A A+VDQ
Sbjct: 48 TPMGQLPVLTVDDFEIPQSAAINRYLARKFGFAGKTPEEEAWVDAVVDQ 96
>AC119287-1|AAO38568.1| 218|Caenorhabditis elegans Glutathione
s-transferase protein34 protein.
Length = 218
Score = 31.9 bits (69), Expect = 0.18
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
+P P L DG + +S AI YL K+G ++A A ++VDQ
Sbjct: 55 TPFGRFPVLSIDGFDLAQSTAIHRYLARKFGYAGKSPEDEAFADSIVDQ 103
>Z80217-5|CAB02291.1| 208|Caenorhabditis elegans Hypothetical
protein F37B1.5 protein.
Length = 208
Score = 31.5 bits (68), Expect = 0.23
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYFDIGTLYQ 381
+P +P L DG + +S AI+ YL K+G E+A A+ D L+ D ++
Sbjct: 47 TPMKQLPVLNIDGFELPQSGAILRYLARKFGFAGKTPEEEAWVDAVHD--LFKDFLAEFK 104
Query: 382 RF 387
+F
Sbjct: 105 KF 106
>AL132949-26|CAB61104.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.30 protein.
Length = 209
Score = 31.5 bits (68), Expect = 0.23
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 202 SPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
+P P L DG I +S AI YL ++G E A A+VDQ
Sbjct: 48 TPFGQAPVLSVDGFEIPQSAAINRYLAKQFGYAGKTPEEQAWTDAIVDQ 96
>Z93379-1|CAB07589.1| 218|Caenorhabditis elegans Hypothetical
protein F21H7.1 protein.
Length = 218
Score = 29.5 bits (63), Expect = 0.94
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 235 DGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 348
DG + +S AI YL K+G ++A A ++VDQ
Sbjct: 66 DGFDLAQSSAIHRYLARKFGYAGKTPEDEAFADSIVDQ 103
>Z68879-5|CAA93087.2| 188|Caenorhabditis elegans Hypothetical
protein K08F4.6 protein.
Length = 188
Score = 29.5 bits (63), Expect = 0.94
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 205 PQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYFDIGTLYQR 384
P +P L DG+ I +S +I +L +YG E+ + +++D L+ D +++
Sbjct: 47 PSGQLPVLEIDGVMISQSASIGRFLARQYGYSGKTPTEEMQVDSIID--LFKDFMLTFRQ 104
Query: 385 F 387
F
Sbjct: 105 F 105
>AF010240-1|AAB65418.1| 188|Caenorhabditis elegans glutathione
S-transferase protein.
Length = 188
Score = 29.5 bits (63), Expect = 0.94
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 205 PQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYFDIGTLYQR 384
P +P L DG+ I +S +I +L +YG E+ + +++D L+ D +++
Sbjct: 47 PSGQLPVLEIDGVMISQSASIGRFLARQYGYSGKTPTEEMQVDSIID--LFKDFMLTFRQ 104
Query: 385 F 387
F
Sbjct: 105 F 105
>U28928-9|AAN63431.1| 471|Caenorhabditis elegans Hypothetical
protein C44B7.10 protein.
Length = 471
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 184 PEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARA 336
P K VPT +++G + SRA + Y+V +YG + L+ ++ R RA
Sbjct: 393 PSISKKGQSKIVPT-INEGAGVVTSRAHVHYVVTEYGI-AQLWGKNMRQRA 441
>Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical
protein F34D10.4 protein.
Length = 692
Score = 27.1 bits (57), Expect = 5.0
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 251 GSRAPSSLTWSTSTVRAAASTQKTLERGRSSISACTLTLVRSTRDSE 391
G+RAPS +ST R ST+++ +G S+ A TL ST + E
Sbjct: 383 GARAPSRAPAPSSTSRETRSTRRSPSKGPSA-PAYTLPFGGSTPNHE 428
>AL032648-4|CAA21700.1| 257|Caenorhabditis elegans Hypothetical
protein Y54G9A.5 protein.
Length = 257
Score = 26.6 bits (56), Expect = 6.7
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -1
Query: 402 IEVISESLVERTNVKVQALIDERPRSSVFWVEAAALTVLVDQVSDDGARLPDR 244
I S+ + R N +ID + S+FW+ ++ +LV V D A +PD+
Sbjct: 15 IFAFSQHFLPRINALKAFIIDSAMKLSIFWI---SIILLV--VCDASAEIPDK 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,230,958
Number of Sequences: 27780
Number of extensions: 145985
Number of successful extensions: 371
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -