Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_B12
(430 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F12.02c |p23fy||translationally controlled tumor protein ho... 84 8e-18
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 30 0.18
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.31
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 29 0.40
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 28 0.53
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 0.71
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 27 0.93
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 26 2.2
SPBC1271.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 2.9
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 26 2.9
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 26 2.9
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 25 3.8
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 3.8
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 3.8
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 25 5.0
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 25 5.0
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 25 5.0
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 24 8.7
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 24 8.7
>SPAC1F12.02c |p23fy||translationally controlled tumor protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 168
Score = 84.2 bits (199), Expect = 8e-18
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Frame = +1
Query: 58 MIIYKDVITGDEMFSDTYRVKLIDEVIYEVTGKTV-IRTQDDIHIDGFNPSAEEADEGTD 234
M++YKDVI+GDE+ SD Y +K +D+++YE + V ++ D+ I G NPSAE+A+E +
Sbjct: 1 MLLYKDVISGDELVSDAYDLKEVDDIVYEADCQMVTVKQGGDVDI-GANPSAEDAEENAE 59
Query: 235 SKVETGVDIVLNHRLVETYAFGDKKSYTLYLKDYMXXXXXXXXXXXXDQVDIFTTN 402
ET ++V + RL T +F DKKSY Y+K YM ++V +F N
Sbjct: 60 EGTETVNNLVYSFRLSPT-SF-DKKSYMSYIKGYMKAIKARLQESNPERVPVFEKN 113
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 29.9 bits (64), Expect = 0.18
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -2
Query: 177 VLCSDHGLAGDFINNFVDQLNSIRIREHLVTSYNILIDYHFDGLE 43
V+C D GL+G+F +SIR + + Y LI Y FDG E
Sbjct: 288 VMCLDLGLSGEFCTAVA---HSIREQCQMYIKYLSLIGYLFDGSE 329
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.31
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = -3
Query: 296 NAYVSTSL*FRTM---STPVSTLESVPSSA---SSAEGLNPSMWISSCVLITVLPVTS*I 135
N STS+ + + STP++T S++ +S + + ISS +T PVT+
Sbjct: 531 NCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 590
Query: 134 TSSINLTLYVSENISSPVITS 72
++ LY S I+SP TS
Sbjct: 591 CTTSTSVLYTSTPITSPNSTS 611
Score = 25.8 bits (54), Expect = 2.9
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 257 STPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSSINLTLYVSENISSPVI 78
+TPV+ +VP ++SS + S+ V T PVTS ++ N T S +S +
Sbjct: 406 TTPVTP--TVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPV 463
Query: 77 TS 72
TS
Sbjct: 464 TS 465
Score = 24.6 bits (51), Expect = 6.6
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -3
Query: 263 TMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS-*ITSSINLTLYVSENISS 87
++STP++ S++S++ + P+ S+ + LP TS T+S ++ S ++S+
Sbjct: 186 SLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLST 245
Query: 86 PV 81
P+
Sbjct: 246 PI 247
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 28.7 bits (61), Expect = 0.40
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +1
Query: 127 DEVIYEVTGKTVIRTQDDIHIDGFNPSAEE-----ADEGTDSKVET-GVDIVLNHRLVE 285
DE+ + + +D + + F EE A E ++ +T +D+VL+HRL+E
Sbjct: 145 DEIRFSSRNSKGVNYNEDAYFESFEEEEEEEMYEYATEVSEEPEDTRAIDVVLDHRLIE 203
>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 579
Score = 28.3 bits (60), Expect = 0.53
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +1
Query: 10 SRSFGFIILNRLQSIKMIIYKDVITGDEMFSDTYRVKLIDEVIYEVTGKTVIR 168
SR+ + I +L +++YK + M DT++ ++ +YE++G +R
Sbjct: 118 SRNLLYSIAEKLGLSSIVVYKAELITSSMLLDTFQTMESNQEMYELSGTRKMR 170
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.9 bits (59), Expect = 0.71
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -3
Query: 287 VSTSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSSINLTLY 108
+S+SL + STP T PS+ S L PS S+ +++ V S +TS I+ T
Sbjct: 566 ISSSLTATSTSTPALTHSITPSNTSYTSSLIPSS--STDYSSSLITVCSNVTSEISSTSL 623
Query: 107 VS 102
S
Sbjct: 624 AS 625
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 27.5 bits (58), Expect = 0.93
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 115 VKLIDEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTDSKVETGVDIVLNHRLVETYA 294
+KLID I + G D HI N A EA ++ +GV +V R + ++
Sbjct: 455 LKLIDFGIAKAIGNDTTNIHRDSHIGTINYMAPEALTDMNAHTNSGVKLVKLGRPSDVWS 514
Query: 295 FG 300
G
Sbjct: 515 LG 516
>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 26.2 bits (55), Expect = 2.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 207 RGVKSINVDIVLCSDHGLAGDFINNFVDQLNSIRIREHLVTSYNILI 67
R ++S+ D L +D +G + N QLNS+ E +T Y+ L+
Sbjct: 82 RSLQSLMAD--LNTDIQASGRDLQNMKQQLNSLSTSERFLTKYHNLV 126
>SPBC1271.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 140
Score = 25.8 bits (54), Expect = 2.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 31 ILNRLQSIKMIIYKDVITGDEMFSDTYRVKLID 129
ILN++ M IY IT D SDTY + D
Sbjct: 30 ILNKIFHPCMYIYSRGITNDTYSSDTYELDWYD 62
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 25.8 bits (54), Expect = 2.9
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Frame = +1
Query: 130 EVIYE--VTGKTVIRTQDDIHIDG---FNPSAEEA-DEGTDSKV 243
E+I E VTG +I Q+ +H+D F P+AE + +GT ++
Sbjct: 501 EIIPEPNVTGNALIELQESLHLDSYGFFFPNAERSLPKGTRGRI 544
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 25.8 bits (54), Expect = 2.9
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -2
Query: 180 IVLCSDHGLAGDFINNFVDQLNSIRIREHLVT--SYNILIDYHFDG 49
+++ S+ L D + ++L SIR ++ + +Y I+ DY FDG
Sbjct: 884 LIINSNGKLPHDVRHQATEKLESIRKQDVAIAHNAYYIITDYDFDG 929
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 25.4 bits (53), Expect = 3.8
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +1
Query: 64 IYKDVITGDEMFSDTYRVKLIDEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTDSKV 243
I K G E ++ ++++ +DE + +T++ DD+ + + E D +V
Sbjct: 21 ILKKHPAGTENITNIWQMRAMDEECRKQLAETILPLPDDVSVTDILIPTRDGTE-IDGRV 79
Query: 244 ETGVDIVLNHR 276
T V + ++R
Sbjct: 80 FTPVSVPADYR 90
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 3.8
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -3
Query: 287 VSTSL*FRTMSTPVSTLESVPSS-ASSAEGLNPSMW 183
V+T++ + + STPVST+ +P++ S GL +++
Sbjct: 981 VATTITYSSSSTPVSTVVVIPTAVCSGVRGLQYAVY 1016
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 3.8
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 308 FLSPNAYVSTSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITS 129
F S ++ L + STP+S P+S ++ G N + + + + T L +S S
Sbjct: 682 FTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSSGFNTTSGLPTSSVSTPLSNSSAYPS 741
Query: 128 SINLTL-YVSENISSPVI 78
S + T +S ++S +I
Sbjct: 742 SGSSTFSRLSSTLTSSII 759
Score = 24.2 bits (50), Expect = 8.7
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = -3
Query: 308 FLSPNAYVSTSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWI----SSCVL--ITVLPV 147
F S ++ L + STP S VP+S ++ G N + + +S L TV P
Sbjct: 651 FTSSGFNTTSGLPTSSASTPSSNSSIVPTSTFTSSGFNTTSGLPTSSASTPLSNSTVAPT 710
Query: 146 TS*ITSSINLTLYV-SENISSPVITS 72
++ +S N T + + ++S+P+ S
Sbjct: 711 STFTSSGFNTTSGLPTSSVSTPLSNS 736
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 25.0 bits (52), Expect = 5.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 127 DEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTD 234
DEV + +G I + +D + EE+DE D
Sbjct: 103 DEVFFSASGDATIHLSGNFLVDEEDEEEEESDEDYD 138
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 25.0 bits (52), Expect = 5.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 190 DGFNPSAEEADEGTDSKVETGVDIVLNHRLVETYAFGD 303
D F PS E +E TD+ ++ V ++ V F D
Sbjct: 16 DIFFPSGSEVEESTDAPIQRTVQPIVTGSSVLALKFAD 53
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 5.0
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3
Query: 254 TPVSTLESVPSSASSAEG 201
+P+S+LES+PS +S+ G
Sbjct: 151 SPISSLESLPSRSSTGSG 168
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 24.2 bits (50), Expect = 8.7
Identities = 12/45 (26%), Positives = 28/45 (62%)
Frame = -2
Query: 138 NNFVDQLNSIRIREHLVTSYNILIDYHFDGLEAI*NNKTETTASL 4
N+F++QLN R +++L + I +D + ++A+ + ++ +SL
Sbjct: 237 NSFINQLNRRRTKDNLTNNPEISLD---EPIKALPSTTSDAPSSL 278
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 24.2 bits (50), Expect = 8.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 157 TVIRTQDDIHIDGFNPSAEEADEGTDSKVE 246
T+ ++DDIH D ++ A+ DE S VE
Sbjct: 50 TIDDSEDDIHYDDYD--ADAVDEEMPSNVE 77
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,645,918
Number of Sequences: 5004
Number of extensions: 31830
Number of successful extensions: 122
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 154448264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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