Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_B09
(289 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G10.08 |idp1||isocitrate dehydrogenase Idp1|Schizosaccharom... 27 0.72
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 0.72
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 25 1.7
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac... 25 2.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 25 2.2
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 25 2.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 2.9
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 25 2.9
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 24 3.8
SPBC23E6.10c |||methylthioribose-1-phosphate isomerase |Schizosa... 24 5.0
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 24 5.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 24 5.0
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 24 5.0
SPBC21C3.18 |spo4||serine/threonine protein kinase Spo4|Schizosa... 23 6.7
SPBC11C11.10 ||SPBC3B8.13c|pseudouridine synthase|Schizosaccharo... 23 6.7
SPCC777.15 |||tRNA dihydrouridine synthase Dus4 |Schizosaccharom... 23 6.7
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 23 6.7
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 23 6.7
SPAC3G6.06c |rad2|fen1|FEN-1 endonuclease|Schizosaccharomyces po... 23 8.8
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 23 8.8
SPAC227.07c |pab1||protein phosphatase regulatory subunit Pab1|S... 23 8.8
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 23 8.8
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 23 8.8
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 23 8.8
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy... 23 8.8
>SPAC6G10.08 |idp1||isocitrate dehydrogenase
Idp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 26.6 bits (56), Expect = 0.72
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 30 VKLSYHDSGIDIRDPLLHVTPINAKKVYSDADIVLSADWVPP 155
+KL Y+D GI+ RD ++A K D+ + + P
Sbjct: 47 IKLDYYDLGIEARDKTNDQITVDAAKAILKNDVGIKCATITP 88
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 0.72
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +1
Query: 181 PSPPRP---LARTSARRASLQSPFRLTGTVRRRTPLN 282
P+PP+P ARTS+ + + SP + V+R T N
Sbjct: 225 PAPPKPRRLAARTSSNSSGVSSPTSVPPPVQRNTRPN 261
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 25.4 bits (53), Expect = 1.7
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 141 DWVPPVCLPRGEPPLSAPPLGENERAPRKSTVSFSLDG 254
DW +P EPP+S L E V FS DG
Sbjct: 262 DWTVTSNVPNKEPPISVQLLHTLEHTSVICYVRFSADG 299
>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 2.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 153 PVCLPRGEPPLSAPPLGENERAPRKSTVSFS 245
P P P + P+G R+P +ST+ S
Sbjct: 344 PQSSPNFNPAMRRSPVGAASRSPSRSTIGIS 374
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.0 bits (52), Expect = 2.2
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -1
Query: 253 PSSEKETVDLRGARSFSPRGGAERGGSPRGKHTGGTQSAESTISA 119
P+S T S GG GG P+ +H G + ++ + SA
Sbjct: 83 PTSSNNTQQAEERPSMPALGGLFAGGMPKLRHIGKSSASAAPPSA 127
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 25.0 bits (52), Expect = 2.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 220 GARSFSPRGGAERGGSPRGKHTGGTQSAEST 128
GA +S G GGS +H GG+ ++T
Sbjct: 198 GAYDYSSSGSHTHGGSHGTEHRGGSYGNDNT 228
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.6 bits (51), Expect = 2.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 147 VPPVCLPRGEPPLSAPPLGENERAPRKST 233
+PP P+ PL APP P +ST
Sbjct: 223 IPPTYTPKQADPLPAPPPPPPPTLPPQST 251
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 24.6 bits (51), Expect = 2.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 187 PPRPLARTSARRASLQSPFRLTG 255
PP+P+ + A AS +SP TG
Sbjct: 357 PPKPMQKFPANAASSESPPNATG 379
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 24.2 bits (50), Expect = 3.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 150 PPVCLPRGEPPLSAP 194
PP+ LP+ PP +AP
Sbjct: 1886 PPMALPKAGPPSAAP 1900
>SPBC23E6.10c |||methylthioribose-1-phosphate isomerase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 359
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 30 VKLSYHDSGIDIRDPLLHVTPIN 98
V++S GID+ P VTP N
Sbjct: 314 VRISIAAPGIDVYSPAFDVTPAN 336
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +3
Query: 150 PPVCLPRGEPPLSAPPLGENERAPRKSTVSFS 245
PP + PP PP N AP S S
Sbjct: 49 PPPSVDHSAPPSGPPPSYSNSAAPATPAASAS 80
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 23.8 bits (49), Expect = 5.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 147 VPPVCLPRGEPPLSAP 194
VPPV P G PP+ P
Sbjct: 1111 VPPVPAPSGAPPVPKP 1126
Score = 23.0 bits (47), Expect = 8.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 150 PPVCLPRGEPPLSAP 194
PPV +P G PP+ P
Sbjct: 1131 PPVPVPSGAPPVPKP 1145
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 189 APPLGENERAPRKSTVSFSLDGNSQKEDPAKP 284
AP E + + T +FSL+ S +D KP
Sbjct: 577 APKTLEEKEETKAPTFNFSLNNASSTQDTTKP 608
>SPBC21C3.18 |spo4||serine/threonine protein kinase
Spo4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/43 (23%), Positives = 26/43 (60%)
Frame = -3
Query: 152 RHPVRREYYIRIAVHFLSIYRCDV**GVTYIDSRVVIGQFDEP 24
+H R++Y++ ++ + Y D+ G+ +ID++ +I + +P
Sbjct: 143 QHAEFRDFYMKYSLPEIGAYLRDLLKGLAHIDAKGIIHRDIKP 185
>SPBC11C11.10 ||SPBC3B8.13c|pseudouridine
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 407
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 178 RPSPPRPLARTSARRASLQSP 240
RP+PP P R RR S + P
Sbjct: 84 RPAPPHPNDRNRRRRKSNRLP 104
>SPCC777.15 |||tRNA dihydrouridine synthase Dus4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 326
Score = 23.4 bits (48), Expect = 6.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 257 VPVKRKGDCRLARRALVLAKGRGGEGRLPAR 165
+PV GD + R+ L +AK +G + AR
Sbjct: 203 IPVVANGDVKSLRKGLEIAKYTETQGIMSAR 233
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 23.4 bits (48), Expect = 6.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 181 PSPPRPLARTSARRASLQSPFRLTGTVRRRTPLN 282
P PRP R +R S + L V+ TPLN
Sbjct: 571 PLLPRPTTRPVSRGLSRGTSSSLQQKVKASTPLN 604
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 23.4 bits (48), Expect = 6.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 147 VPPVCLPRGEPPLSAPPLGENERAPRKSTVSFSL 248
VP + P P APPL + A RKS S +L
Sbjct: 556 VPTIIAP-ALPSTPAPPLPSHPMATRKSLSSTNL 588
>SPAC3G6.06c |rad2|fen1|FEN-1 endonuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 380
Score = 23.0 bits (47), Expect = 8.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 283 GLAGSSF*LFPSSEKETVDLRGARSFSPRGGAERGGSPRGK 161
G S F PSS K+ VD + S + + +GG + K
Sbjct: 339 GRLDSFFKPVPSSPKKPVDTKSKGSAKRKRDSNKGGESKKK 379
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 23.0 bits (47), Expect = 8.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 93 INAKKVYSDADIVLSADWVPPVCLPRGEPPLSAPPL 200
I + V +D + +AD PV RG PPL+ P +
Sbjct: 290 IRKEVVVTDQPLFSTAD--VPVKRKRGRPPLNKPKI 323
>SPAC227.07c |pab1||protein phosphatase regulatory subunit
Pab1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 23.0 bits (47), Expect = 8.8
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 24 RLVKLSYHDSGIDIRDPLL----HVTPINAKKVYSDADIVLSAD 143
RL +L++HD I + H IN+ V SDA+ +SAD
Sbjct: 152 RLPRLNHHDMIIAAYPRRVYANAHAYHINSISVNSDAETYISAD 195
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 23.0 bits (47), Expect = 8.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 1 PGLQNSARGSSNCPITTRESIYVTPY 78
P L +S+C +IYVTPY
Sbjct: 529 PVLSQPGTTNSDCSGFAENNIYVTPY 554
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 23.0 bits (47), Expect = 8.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 175 SRPSPPRPLARTSARRAS 228
S+P PP+PL+R+ + S
Sbjct: 313 SKPLPPKPLSRSKSSSLS 330
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 23.0 bits (47), Expect = 8.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 14 IRHEARQTVLSRLGNRYT*PPTTRHTDKC 100
I H QTVL+ + + Y P HT C
Sbjct: 383 ITHHRMQTVLNDVIDAYEKLPDCSHTPNC 411
>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 478
Score = 23.0 bits (47), Expect = 8.8
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 45 HDSGIDIRDPLLHVTPINAKKVYSDADIVLSAD 143
H S +D+ DP+ H I K + +V +D
Sbjct: 112 HSSKVDLEDPVFHGEIIVPGKHSKNMQVVTDSD 144
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,089,934
Number of Sequences: 5004
Number of extensions: 18414
Number of successful extensions: 80
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 67723590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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