Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_B09
         (289 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           21   3.0  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           21   3.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   4.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   4.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   7.0  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    19   9.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    19   9.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   9.2  

>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 109 TFLAFIGVTCSRGSRI 62
           TFL F+G++ S  +RI
Sbjct: 3   TFLRFLGISSSDDNRI 18


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 109 TFLAFIGVTCSRGSRI 62
           TFL F+G++ S  +RI
Sbjct: 3   TFLRFLGISSSDDNRI 18


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +3

Query: 111 YSDADIVLSADWVPPVCLPRGEPPLSAPP 197
           Y   +IVL     PP   P   PP S+ P
Sbjct: 325 YCLVNIVLGDSDTPPKPAPPPPPPSSSGP 353


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 3/15 (20%)
 Frame = -1

Query: 181 GGS---PRGKHTGGT 146
           GGS   PRGK+ GGT
Sbjct: 139 GGSCYWPRGKNLGGT 153


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 99  AKKVYSDADIVLS 137
           AKKV  D DI+L+
Sbjct: 696 AKKVKKDKDIILN 708


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -3

Query: 284 GFSGVLLLTVPVKRKGDC 231
           GF G     V VK  G C
Sbjct: 119 GFDGTYPTNVVVKNNGTC 136


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 241 KETVDLRGARSFSPRG 194
           K  VDL     F+PRG
Sbjct: 454 KSDVDLSRGLDFTPRG 469


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 8   CRIRHEARQT 37
           CR RHE R T
Sbjct: 522 CRPRHEIRST 531


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,460
Number of Sequences: 438
Number of extensions: 1688
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)