Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_B08
         (248 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M14548-1|AAB59221.1|  613|Drosophila melanogaster segmentation p...    27   4.6  
AY059447-1|AAL13353.1|  590|Drosophila melanogaster GH22686p pro...    27   4.6  
AE014134-2152|AAF53160.1|  590|Drosophila melanogaster CG6716-PA...    27   4.6  
AE014134-2151|AAN10801.1|  613|Drosophila melanogaster CG6716-PB...    27   4.6  

>M14548-1|AAB59221.1|  613|Drosophila melanogaster segmentation
           protein protein.
          Length = 613

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 19/67 (28%), Positives = 23/67 (34%)
 Frame = +2

Query: 2   HEGHIQI*FEKVRIFPRLKYVTKTYAPPRSCE*A*YFEDGSRNLDTFPNVSAVNVCYMMT 181
           H GH           P+       Y PP S     +F   + N   FP+ S VN   M  
Sbjct: 549 HHGHPHAPHPHAHPHPQYAGAHPHYPPPSSSA---HFMPQNFNAAAFPSPSKVNYTTMPP 605

Query: 182 SP*VPIW 202
            P  P W
Sbjct: 606 QPFYPSW 612


>AY059447-1|AAL13353.1|  590|Drosophila melanogaster GH22686p
           protein.
          Length = 590

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 19/67 (28%), Positives = 23/67 (34%)
 Frame = +2

Query: 2   HEGHIQI*FEKVRIFPRLKYVTKTYAPPRSCE*A*YFEDGSRNLDTFPNVSAVNVCYMMT 181
           H GH           P+       Y PP S     +F   + N   FP+ S VN   M  
Sbjct: 526 HHGHPHAPHPHAHPHPQYAGAHPHYPPPSSSA---HFMPQNFNAAAFPSPSKVNYTTMPP 582

Query: 182 SP*VPIW 202
            P  P W
Sbjct: 583 QPFYPSW 589


>AE014134-2152|AAF53160.1|  590|Drosophila melanogaster CG6716-PA,
           isoform A protein.
          Length = 590

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 19/67 (28%), Positives = 23/67 (34%)
 Frame = +2

Query: 2   HEGHIQI*FEKVRIFPRLKYVTKTYAPPRSCE*A*YFEDGSRNLDTFPNVSAVNVCYMMT 181
           H GH           P+       Y PP S     +F   + N   FP+ S VN   M  
Sbjct: 526 HHGHPHAPHPHAHPHPQYAGAHPHYPPPSSSA---HFMPQNFNAAAFPSPSKVNYTTMPP 582

Query: 182 SP*VPIW 202
            P  P W
Sbjct: 583 QPFYPSW 589


>AE014134-2151|AAN10801.1|  613|Drosophila melanogaster CG6716-PB,
           isoform B protein.
          Length = 613

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 19/67 (28%), Positives = 23/67 (34%)
 Frame = +2

Query: 2   HEGHIQI*FEKVRIFPRLKYVTKTYAPPRSCE*A*YFEDGSRNLDTFPNVSAVNVCYMMT 181
           H GH           P+       Y PP S     +F   + N   FP+ S VN   M  
Sbjct: 549 HHGHPHAPHPHAHPHPQYAGAHPHYPPPSSSA---HFMPQNFNAAAFPSPSKVNYTTMPP 605

Query: 182 SP*VPIW 202
            P  P W
Sbjct: 606 QPFYPSW 612


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,500,875
Number of Sequences: 53049
Number of extensions: 206694
Number of successful extensions: 435
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)