Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_B07
         (208 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IM35 Cluster: Putative uncharacterized protein; n=3; ...    35   0.32 
UniRef50_Q4Y0B2 Cluster: Putative uncharacterized protein; n=6; ...    31   5.1  
UniRef50_Q7RA63 Cluster: Arabidopsis thaliana At1g71270/F3I17_8;...    30   9.0  
UniRef50_Q6LFB4 Cluster: Putative uncharacterized protein; n=2; ...    30   9.0  
UniRef50_A0BR23 Cluster: Chromosome undetermined scaffold_121, w...    30   9.0  

>UniRef50_Q8IM35 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1105

 Score = 35.1 bits (77), Expect = 0.32
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -1

Query: 112 SNNYNKMNDRSTDNIHLYYIFYLFLCKNKMNEKSILV 2
           +NN N  N+ + DNI+  Y F+  LC+ K N+K +++
Sbjct: 287 NNNKNNNNNNNNDNIYFRYFFH-ELCQTKKNDKKVIL 322


>UniRef50_Q4Y0B2 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 910

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 115 MSNNYNKMNDRSTDNIHLYYIFYLFLCKNKMNEKSI 8
           MSNN+   ND+    I+ YY     L  NKM+E+ I
Sbjct: 718 MSNNFQNKNDKLLFLINNYYHIITILKSNKMDEEKI 753


>UniRef50_Q7RA63 Cluster: Arabidopsis thaliana At1g71270/F3I17_8;
           n=3; Plasmodium (Vinckeia)|Rep: Arabidopsis thaliana
           At1g71270/F3I17_8 - Plasmodium yoelii yoelii
          Length = 1050

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 115 MSNNYNKMNDRSTDNIHLYYIFYLFLCKNKMNEKSI 8
           +SNN+  +ND+    I+ YY     L  NK+NE  I
Sbjct: 854 LSNNFQNINDKLLFLINNYYHIITILKNNKINEDKI 889


>UniRef50_Q6LFB4 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 2528

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -1

Query: 118  IMSNNYNKM-NDRSTDNIHLYYIFYLFLCKNKM 23
            I   + N+M N +  DN++LY+I Y ++ KN+M
Sbjct: 1332 IKEKDINQMDNYKKYDNLNLYFIIYKYMKKNRM 1364


>UniRef50_A0BR23 Cluster: Chromosome undetermined scaffold_121,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_121,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 594

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 100 NKMNDRSTDNIHLYYIFYLFLCKNKMNEKSILV 2
           N+ N + T+    YY  Y   CKN+M+++S+L+
Sbjct: 254 NQSNIQKTEESQQYYKTYCNKCKNRMSQESLLL 286


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,379,689
Number of Sequences: 1657284
Number of extensions: 1847907
Number of successful extensions: 6148
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6121
length of database: 575,637,011
effective HSP length: 47
effective length of database: 497,744,663
effective search space used: 10452637923
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)