Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_B07
         (208 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113223-1|AAM29228.1|  532|Drosophila melanogaster AT09365p pro...    26   8.3  
AE014296-2749|AAF49454.2| 1662|Drosophila melanogaster CG32158-P...    26   8.3  
AE014296-2744|AAN11753.2|  532|Drosophila melanogaster CG32158-P...    26   8.3  
AE014296-2743|AAS64985.1|  821|Drosophila melanogaster CG32158-P...    26   8.3  

>AY113223-1|AAM29228.1|  532|Drosophila melanogaster AT09365p
           protein.
          Length = 532

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 92  HFIIVVTH-DNMFKSHCDNICLIF 160
           HF+    H D+++   CD++C++F
Sbjct: 101 HFLSREKHLDDLYHEQCDSVCILF 124


>AE014296-2749|AAF49454.2| 1662|Drosophila melanogaster CG32158-PB,
            isoform B protein.
          Length = 1662

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 92   HFIIVVTH-DNMFKSHCDNICLIF 160
            HF+    H D+++   CD++C++F
Sbjct: 1082 HFLSREKHLDDLYHEQCDSVCILF 1105


>AE014296-2744|AAN11753.2|  532|Drosophila melanogaster CG32158-PA,
           isoform A protein.
          Length = 532

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 92  HFIIVVTH-DNMFKSHCDNICLIF 160
           HF+    H D+++   CD++C++F
Sbjct: 101 HFLSREKHLDDLYHEQCDSVCILF 124


>AE014296-2743|AAS64985.1|  821|Drosophila melanogaster CG32158-PF,
           isoform F protein.
          Length = 821

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 92  HFIIVVTH-DNMFKSHCDNICLIF 160
           HF+    H D+++   CD++C++F
Sbjct: 338 HFLSREKHLDDLYHEQCDSVCILF 361


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,338,449
Number of Sequences: 53049
Number of extensions: 77850
Number of successful extensions: 180
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 24,988,368
effective HSP length: 48
effective length of database: 22,442,016
effective search space used: 448840320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)