Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_B04
(276 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 71 4e-14
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 55 2e-09
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 46 1e-06
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 45 2e-06
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 45 2e-06
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 44 5e-06
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 35 0.002
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 27 0.65
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 25 1.5
SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual 25 2.0
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 25 2.0
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 2.0
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 25 2.6
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 2.6
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 24 3.5
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 24 3.5
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ... 24 4.6
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 24 4.6
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 24 4.6
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 23 6.1
SPCC16A11.05c |dim1||U4/U6 x U5 tri-snRNP complex subunit Dim1|S... 23 8.0
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 23 8.0
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 23 8.0
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 23 8.0
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 70.5 bits (165), Expect = 4e-14
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +1
Query: 82 IKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECE 261
+ D + K+ + + DKLVV+DF ATWCGPCK I PK ++ +N SD+ +KVDVD+
Sbjct: 5 VSDSSEFKSIVCQ--DKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDA-TFIKVDVDQLS 61
Query: 262 DIAAE 276
+IAAE
Sbjct: 62 EIAAE 66
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 54.8 bits (126), Expect = 2e-09
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +1
Query: 82 IKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECE 261
++ F D TR+S DK+ V+DF A WCGPCK + P L+++ +E + + V+ D+
Sbjct: 22 VESFGDYNTRIS--ADKVTVVDFYADWCGPCKYLKPFLEKL-SEQNQKASFIAVNADKFS 78
Query: 262 DIA 270
DIA
Sbjct: 79 DIA 81
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 46.0 bits (104), Expect = 1e-06
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +1
Query: 127 DKLVVIDFMATWCGPCKMIGPKLDEMANEM-SDSIVVLKVDVDECEDIAAE 276
DK++++ F A WCG CK + P+ + A+E+ D I +++VD E D+ +E
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSE 89
Score = 46.0 bits (104), Expect = 1e-06
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +1
Query: 88 DFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDE 255
+FDD+ + E D V+++F A WCG CK + P +++A E SD ++VV K+D E
Sbjct: 364 NFDDIV--MDETKD--VLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATE 417
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 44.8 bits (101), Expect = 2e-06
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 76 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDV 249
+ ++ ++L+ + A K +I+F ATWCG CK + P +E+ D +++ K+D
Sbjct: 23 VELQSLNELENTI-RASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDA 81
Query: 250 DECEDIA 270
D D+A
Sbjct: 82 DTHSDVA 88
Score = 35.1 bits (77), Expect = 0.002
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 130 KLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDI 267
K V+++F A WCG CK + P + + + ++ ++K++ D DI
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADI 206
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 44.8 bits (101), Expect = 2e-06
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 76 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANE-MSDSIVVLKVDVD 252
I I+ + + + ++G + +D A WCGPCK I P ++A++ S V KV+VD
Sbjct: 4 IEIRSYQHWISTIPKSG--YLAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVD 61
Query: 253 ECEDIAA 273
E IA+
Sbjct: 62 EQRQIAS 68
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 43.6 bits (98), Expect = 5e-06
Identities = 18/67 (26%), Positives = 37/67 (55%)
Frame = +1
Query: 70 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDV 249
MS+ I + + L +++++++F A W PCK + D+ A + ++ V LK++
Sbjct: 1 MSVEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNA-VFLKIEA 59
Query: 250 DECEDIA 270
++ DIA
Sbjct: 60 EKFSDIA 66
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 34.7 bits (76), Expect = 0.002
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 124 GDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVD 252
G LVV F A WCG CK + P ++A+ + + V VD D
Sbjct: 49 GPSLVV--FYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCD 89
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 26.6 bits (56), Expect = 0.65
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +1
Query: 115 SEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSI 228
SE I + CG CK +GP D M + + +
Sbjct: 38 SEVSKGTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQV 75
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 25.4 bits (53), Expect = 1.5
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 162 PSRHEVNHDELVARLRQPGLQVIEVLDVDRHFVPLNRKTIK 40
PS + D++VA LRQ + + RH + ++R K
Sbjct: 335 PSSQNDSFDDVVACLRQKSTPYLSFIKKARHLIQVSRDKYK 375
>SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 25.0 bits (52), Expect = 2.0
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = -1
Query: 216 HFVSHLVEFGPDHLAGSAPSRHEVNHDELVARLRQPGL 103
HF SHL + P G S +NH Q GL
Sbjct: 207 HFDSHLDSWKPKVFGGGKSSVGSINHGTYFYHASQEGL 244
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 2.0
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 103 KTRLSEAGDKLVVI---DFMATWCGPCKMIGPKLDEMANEMSDSIVVL 237
K +EAG I D ++ W G + + +L EMA E SI+ +
Sbjct: 180 KAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFI 227
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.0 bits (52), Expect = 2.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -1
Query: 156 RHEVNHDELVARLRQPGLQVIEVLDVDRHFVPLNR 52
+H+++HDE R + +I+ + D + LNR
Sbjct: 641 KHDIHHDEKERRTTVDNVSIIDFNEEDTVYKMLNR 675
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 2.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 94 DDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIV 231
D + RL EAG + +A CGPC + + D++A+ ++I+
Sbjct: 433 DGITERLEEAGATV-----LANACGPCIGMWKRTDDIASGEPNAIL 473
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 24.6 bits (51), Expect = 2.6
Identities = 8/36 (22%), Positives = 20/36 (55%)
Frame = -1
Query: 159 SRHEVNHDELVARLRQPGLQVIEVLDVDRHFVPLNR 52
S++ NHD+ + + + + +++ +HF P+ R
Sbjct: 317 SKNNENHDQSENKEEEEDMMLTRPIEIPQHFSPIAR 352
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 24.2 bits (50), Expect = 3.5
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 145 QSRRACRPPPTAWSSSHRSP*C-GSTFCTFK*ENNKIDR 32
QS R CR PP +S + P G C + N +I R
Sbjct: 418 QSTRICRIPPETMASLYCGPEADGKYVCLYNGCNKRIAR 456
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 24.2 bits (50), Expect = 3.5
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 61 RYKMSIHIKDFDDLKTRLSEAGDKLV-VIDFMATWC-GPCKMIGPKLDEMANEMSD 222
+YK+ H D + + RL+E D+L + D +A+ + G +D + + SD
Sbjct: 762 KYKLEKHEMDANQVNARLTEVQDRLKDITDKLASAREDAMSLYGSVVDSLQTQSSD 817
>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 846
Score = 23.8 bits (49), Expect = 4.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 204 HLVEFGP-DHLAGSAPSRHEVNHDELVARLRQPGLQVIEVLD 82
H E G DHLA + H +NH L+ ++ P LQ + LD
Sbjct: 602 HCGEAGDTDHLASAFLLSHGINHGILLRKV--PFLQYLWYLD 641
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 23.8 bits (49), Expect = 4.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 182 SGPNSTRWLTKCPTPLLFLRSTLTNARTSPP 274
S NST + TPL + ST T + +S P
Sbjct: 293 SSANSTTATSASSTPLTSVNSTTTTSASSTP 323
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 23.8 bits (49), Expect = 4.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 91 FDDLKTRLSEAGDKL 135
+DDL +L+EAGD+L
Sbjct: 33 YDDLGNQLNEAGDEL 47
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 23.4 bits (48), Expect = 6.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -3
Query: 130 CRPPPTAWSSSHRSP*CGSTFC 65
CR P T + H CG FC
Sbjct: 179 CRTPFTFTNRKHHCRNCGGVFC 200
>SPCC16A11.05c |dim1||U4/U6 x U5 tri-snRNP complex subunit
Dim1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 142
Score = 23.0 bits (47), Expect = 8.0
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 112 LSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECED 264
LSE ++LVVI F C L +A ++ + V+ VD+DE D
Sbjct: 19 LSEQ-ERLVVIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYLVDIDEVPD 68
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1052
Score = 23.0 bits (47), Expect = 8.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 66 QNVDPHQGLR*LEDQAVGGGRQARRD*LHGDLVRTLQDD 182
+N+D Q + E AV QA L ++ T QDD
Sbjct: 885 ENIDISQDISMTETNAVDDEVQAENSILQDEVEETRQDD 923
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 23.0 bits (47), Expect = 8.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 140 TTSLSPASDSLVFKSSKSLMWIDILYL 60
T +LSP S+ K SK+L+ +LYL
Sbjct: 343 TIALSPTKLSMASKHSKNLVSERMLYL 369
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 23.0 bits (47), Expect = 8.0
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = -2
Query: 215 ISLAISSSLGPIILQGPHQVAMKSITTSLS----PASDSLVFKSSK 90
IS ISSS I++ P S TT+++ PA+++++ +SSK
Sbjct: 307 ISSTISSS--SFIVESPSVALSTSSTTTITNASTPAANTIISRSSK 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,099,192
Number of Sequences: 5004
Number of extensions: 19288
Number of successful extensions: 70
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 61717020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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