Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_B04
         (276 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    99   3e-23
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    22   3.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            21   6.4  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    21   6.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           21   8.5  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 99.1 bits (236), Expect = 3e-23
 Identities = 40/65 (61%), Positives = 53/65 (81%)
 Frame = +1

Query: 82  IKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECE 261
           +KD +D   +L  AGD+LVV+DF ATWCGPCK+I PKL+E  N+ +D IVV+KVDVDECE
Sbjct: 5   VKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECE 64

Query: 262 DIAAE 276
           ++AA+
Sbjct: 65  ELAAQ 69


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 167 PHQVAMKSITTSLSPASDSLVF 102
           PH  A      ++  ASDSL+F
Sbjct: 44  PHSEAQLRSVAAMEQASDSLIF 65


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -2

Query: 224  ESDISLAISSSLGPIILQGPHQVAMKSIT 138
            +SDI ++ +S   PI+  GP+++  + I+
Sbjct: 1308 QSDIMISDASGRHPIVDLGPYRLVDEMIS 1336


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 169 VRTKSP*SQSRRACRPPPT 113
           V  K   + SRRACRP  T
Sbjct: 3   VMLKQEVNLSRRACRPTTT 21


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 164 ADPAR*SGPNSTRWLT 211
           ADP+R SGP+S  W++
Sbjct: 214 ADPSRNSGPSS--WMS 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,748
Number of Sequences: 2352
Number of extensions: 5361
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16167927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)