Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_B03
         (279 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   0.71 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    22   5.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          21   6.6  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        21   6.6  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        21   6.6  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        21   6.6  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        21   6.6  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    21   6.6  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           21   8.7  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    21   8.7  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 14  PEPPPASRCCSNMNRNSYTPSTHTGTRRCTLRR 112
           P PP A R    + R       H  TRRC   R
Sbjct: 402 PNPPWADRTLKRLKRVKRAAYRHYQTRRCQRSR 434


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 112  RQGHFGCVVILLARGAKTDVENSAGEV 192
            R G F  V  +LAR A  +     GEV
Sbjct: 1071 RLGDFELVPAVLARAAANEAAEPTGEV 1097


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +1

Query: 76  NAHGDTPLHIAARQGHFGCVVILLARGAKTDVENSAGEVP 195
           N   +T LH+A        V  LL  GAK    +  G  P
Sbjct: 781 NDRNETGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTP 820


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 137 TTHPKCP*RAAMCSGVSPCALRAC 66
           TT  K P   A+CSG   C    C
Sbjct: 24  TTGCKAPSNDAVCSGHGQCNCGRC 47


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 137 TTHPKCP*RAAMCSGVSPCALRAC 66
           TT  K P   A+CSG   C    C
Sbjct: 24  TTGCKAPSNDAVCSGHGQCNCGRC 47


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 137 TTHPKCP*RAAMCSGVSPCALRAC 66
           TT  K P   A+CSG   C    C
Sbjct: 24  TTGCKAPSNDAVCSGHGQCNCGRC 47


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 137 TTHPKCP*RAAMCSGVSPCALRAC 66
           TT  K P   A+CSG   C    C
Sbjct: 24  TTGCKAPSNDAVCSGHGQCNCGRC 47


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 137 TTHPKCP*RAAMCSGVSPCALRAC 66
           TT  K P   A+CSG   C    C
Sbjct: 600 TTGCKAPSNDAVCSGHGQCNCGRC 623


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 184 GEVPADVCTGQCHSAV 231
           G+V  + C G+C+S V
Sbjct: 111 GDVTVNKCEGKCNSQV 126


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/38 (23%), Positives = 15/38 (39%)
 Frame = -2

Query: 230 TALWHCPVHTSAGTSPAEFSTSVLAPRASRITTHPKCP 117
           T +W  P  T+       +  +   P ++   T P CP
Sbjct: 253 TTVWTDPTTTTTTDYTTAYPPTTSEPPSTPHPTDPHCP 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,696
Number of Sequences: 2352
Number of extensions: 5777
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16604898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)