Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_B02
         (216 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   1.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   3.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   5.1  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    19   6.7  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    19   6.7  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   8.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    19   8.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    19   8.8  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 171 TYVMLAPTRVALEALGYSLS 112
           TYV L P+ V + ALG  +S
Sbjct: 218 TYVALYPSSVQVIALGVGVS 237


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 3   TRIRDNKFYLFYSSV 47
           T +RD  FY+ Y ++
Sbjct: 413 TSMRDPAFYMLYQNI 427


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 3   TRIRDNKFYLFYSSV 47
           T +RD  FY+ Y  +
Sbjct: 413 TSMRDPAFYMLYQKI 427


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 195 KSSRDSPATYVMLAPTR 145
           KS +   A  VML PT+
Sbjct: 392 KSIKSGDAAIVMLQPTK 408


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 195 KSSRDSPATYVMLAPTR 145
           KS +   A  VML PT+
Sbjct: 103 KSIKSGDAAIVMLQPTK 119


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 129 LGYSLSAAVITVEIST 82
           L   LS  V+TV IST
Sbjct: 58  LSAMLSLVVVTVAIST 73


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 3   TRIRDNKFYLFYSSVED 53
           T +RD  FY +++ V+D
Sbjct: 394 TAMRDPIFYRWHAFVDD 410


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -1

Query: 120 SLSAAVITVEISTSSIGTNYPIY 52
           S    +   +++  SI  NYP++
Sbjct: 571 SFCEMIHNAQVNKRSIHNNYPVH 593


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,667
Number of Sequences: 438
Number of extensions: 942
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)