Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_A24
         (178 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061286-1|AAL28834.1|  341|Drosophila melanogaster LD20358p pro...    39   8e-04
AE014296-3413|AAF51636.1|  341|Drosophila melanogaster CG3947-PA...    39   8e-04
AE014296-1226|AAN12051.1| 1130|Drosophila melanogaster CG8601-PB...    26   8.0  
AE014296-1225|AAF50581.2| 1145|Drosophila melanogaster CG8601-PA...    26   8.0  

>AY061286-1|AAL28834.1|  341|Drosophila melanogaster LD20358p
           protein.
          Length = 341

 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +3

Query: 15  DYCEVLIELIVKTKYGNRGKWTVATVLQLFKCSSA*ILMLRFKEVPVCHPPIA 173
           +Y EV IE+  +  +G  GKW V  ++Q FK +    ++       +  PPIA
Sbjct: 95  EYSEVFIEISARRLFGQSGKWLVIALIQAFKAAGRFFILKHSTSDIITSPPIA 147


>AE014296-3413|AAF51636.1|  341|Drosophila melanogaster CG3947-PA
           protein.
          Length = 341

 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +3

Query: 15  DYCEVLIELIVKTKYGNRGKWTVATVLQLFKCSSA*ILMLRFKEVPVCHPPIA 173
           +Y EV IE+  +  +G  GKW V  ++Q FK +    ++       +  PPIA
Sbjct: 95  EYSEVFIEISARRLFGQSGKWLVIALIQAFKAAGRFFILKHSTSDIITSPPIA 147


>AE014296-1226|AAN12051.1| 1130|Drosophila melanogaster CG8601-PB,
           isoform B protein.
          Length = 1130

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 12  EDYCEVLIELIVKTKYGNRGKW 77
           EDY  + +  +V +K G RGKW
Sbjct: 190 EDYKSLAVLPVVASKGGRRGKW 211


>AE014296-1225|AAF50581.2| 1145|Drosophila melanogaster CG8601-PA,
           isoform A protein.
          Length = 1145

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 12  EDYCEVLIELIVKTKYGNRGKW 77
           EDY  + +  +V +K G RGKW
Sbjct: 190 EDYKSLAVLPVVASKGGRRGKW 211


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,347,257
Number of Sequences: 53049
Number of extensions: 100220
Number of successful extensions: 182
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 24,988,368
effective HSP length: 39
effective length of database: 22,919,457
effective search space used: 435469683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)