Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A23
(256 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0121 - 963297-963743 39 5e-04
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651 38 0.001
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 36 0.006
03_02_0817 + 11492699-11492774,11493605-11493978 36 0.006
01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097 36 0.006
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 36 0.006
05_05_0309 - 23987669-23988042,23989485-23989560 35 0.008
05_06_0200 + 26329211-26329251,26329471-26329564,26329691-263297... 30 0.30
07_03_1286 + 25482632-25482685,25483948-25484145,25484242-254844... 29 0.39
09_04_0098 - 14580949-14581176,14581213-14581470 28 1.2
06_01_1133 + 9364842-9364850,9364929-9365048,9365157-9365476,936... 28 1.2
04_03_1019 + 21759368-21760546 28 1.2
01_05_0593 + 23494515-23494706,23495819-23495936,23496302-234963... 28 1.2
01_01_0226 - 1930276-1930821 28 1.2
05_03_0020 - 7433619-7434089 27 1.6
06_03_1491 - 30510016-30510021,30510418-30511026,30511119-305114... 27 2.1
11_06_0131 - 20416257-20417635,20419525-20419905,20420703-20423415 27 2.8
06_03_0598 + 22621765-22624795,22624903-22625066,22625290-226253... 27 2.8
10_07_0048 - 12354566-12354639,12355563-12355665,12355781-123559... 26 3.6
02_05_0866 - 32331629-32334328 26 3.6
01_07_0179 - 41814886-41815074,41815172-41815222,41815365-418154... 26 4.8
01_06_1559 + 38247463-38247499,38247711-38247747,38248181-382482... 26 4.8
11_01_0464 + 3597568-3600244,3600345-3600742 25 6.4
05_04_0127 - 18262499-18263104 25 6.4
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 25 6.4
01_07_0217 + 42072475-42072915 25 6.4
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398... 25 8.4
11_06_0304 - 22206490-22207065 25 8.4
04_01_0252 - 3329712-3331061 25 8.4
03_06_0660 - 35349264-35349375,35349914-35350017,35350211-353503... 25 8.4
>08_01_0121 - 963297-963743
Length = 148
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 57 DLSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
+LS+ + AFS++D +G G+I LG L+R+L NPT A
Sbjct: 5 ELSEEQVASMREAFSLFDTDGDGRIAPSELGVLMRSLGGNPTQA 48
>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
Length = 187
Score = 37.5 bits (83), Expect = 0.001
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 51 MSD-LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
M+D LS+ I AFS++D +G G I LG ++R+L NPT A
Sbjct: 1 MADQLSEEQIGEFREAFSLFDKDGDGSITTKELGTVMRSLGQNPTEA 47
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 35.5 bits (78), Expect = 0.006
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 51 MSD-LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
M+D L+ + I AFS++D +G G I LG ++R+L NPT A
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEA 47
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 35.5 bits (78), Expect = 0.006
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 51 MSD-LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
M+D L+ + I AFS++D +G G I LG ++R+L NPT A
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEA 47
>01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097
Length = 171
Score = 35.5 bits (78), Expect = 0.006
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 51 MSD-LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
M+D L+ + I AFS++D +G G I LG ++R+L NPT A
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEA 47
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 35.5 bits (78), Expect = 0.006
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 51 MSD-LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
M+D L+ + I AFS++D +G G I LG ++R+L NPT A
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEA 47
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 35.1 bits (77), Expect = 0.008
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 51 MSD-LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
M+D L+ I AFS++D +G G I LG ++R+L NPT A
Sbjct: 1 MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEA 47
>05_06_0200 +
26329211-26329251,26329471-26329564,26329691-26329750,
26329871-26329979,26330065-26330117,26330244-26330324,
26330429-26330541,26330637-26330691
Length = 201
Score = 29.9 bits (64), Expect = 0.30
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 78 ERASFAFSIYDFEGKGKIDAYNLGDLLRAL 167
E+ +FAF +YD G G I+ L +++ AL
Sbjct: 98 EKTAFAFKLYDLRGTGYIEKEELREMVLAL 127
>07_03_1286 +
25482632-25482685,25483948-25484145,25484242-25484464,
25484762-25484958,25485150-25485237,25487103-25487197,
25487585-25487705,25487795-25487831,25487924-25487951,
25488175-25488327,25488666-25488768,25488868-25488932
Length = 453
Score = 29.5 bits (63), Expect = 0.39
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 18 RPGGNQRSPHKMSDLSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPT 182
RP G + PH ++ + +I+ A F ++D + G IDA L +RAL T
Sbjct: 296 RPRGAR--PHGLTKQKRQEIKEA---FDLFDTDNSGTIDAKELNVAMRALGFEMT 345
>09_04_0098 - 14580949-14581176,14581213-14581470
Length = 161
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 84 ASFAFSIYDFEGKGKIDAYNLGDLLRAL 167
A+ AF ++D G G IDA LG +L +L
Sbjct: 94 AAAAFRVFDRNGDGFIDAGELGSVLASL 121
>06_01_1133 +
9364842-9364850,9364929-9365048,9365157-9365476,
9366267-9366428,9367151-9367235,9367352-9367501,
9367588-9367635,9367705-9367773,9367897-9368600,
9369426-9369561,9369636-9369856,9370355-9370486,
9371316-9371406,9371878-9371925,9372004-9372132,
9372357-9372626
Length = 897
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 45 HKMSDLSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNP 179
HK +D +R + +F +++ + +DAY +GD L+ N +P
Sbjct: 784 HKEADKRGKIYDRENSSF-LFNLNNEYVLDAYRMGDKLKFANHSP 827
>04_03_1019 + 21759368-21760546
Length = 392
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 16 EDREGTNDHHTK*ATSARTTLKGHPSPSPSMISRAKARSM 135
E+ +G+ T ATS+ T+ PSPSPS + A A M
Sbjct: 244 EEAQGSEILPTSGATSSSTSGHSVPSPSPSPSAAAAAEMM 283
>01_05_0593 +
23494515-23494706,23495819-23495936,23496302-23496384,
23496468-23496524,23497004-23497112,23497230-23497282,
23497644-23497724,23497815-23497931
Length = 269
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 78 ERASFAFSIYDFEGKGKIDAYNLGDLLRAL 167
++A FAF +YD G I+ + L +++ AL
Sbjct: 183 QKAGFAFKLYDLRQTGFIERHELKEMVLAL 212
>01_01_0226 - 1930276-1930821
Length = 181
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 93 AFSIYDFEGKGKIDAYNLGDLL 158
AF +YD +G G+I A LG +L
Sbjct: 108 AFDVYDVDGDGRITAAELGKVL 129
>05_03_0020 - 7433619-7434089
Length = 156
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 96 FSIYDFEGKGKIDAYNLGDLLRALNS 173
F YD G GKI A L +LRAL +
Sbjct: 8 FRRYDANGDGKISAEELASVLRALGA 33
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 93 AFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
AF +YD + GKI A L +LR L ++A
Sbjct: 92 AFRMYDADSNGKISARELHRVLRQLGDKCSVA 123
>06_03_1491 -
30510016-30510021,30510418-30511026,30511119-30511484,
30511660-30511721,30511826-30511937,30512074-30512211,
30512788-30512811
Length = 438
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 5 EVPVKTGREPTITTQNERPQQERH*KGILRLLHL*FRGQRQ 127
E PVK + TIT Q E+ +E H K L L L R RQ
Sbjct: 50 EFPVKVRKPYTITKQREKWTEEEHDK-FLEALKLYGRSWRQ 89
>11_06_0131 - 20416257-20417635,20419525-20419905,20420703-20423415
Length = 1490
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 46 TK*ATSARTTLKGHPSPSPSMISRAKARSMPT 141
TK +RT++KGHP S S + +A PT
Sbjct: 692 TKKGAPSRTSMKGHPLVSYSQLVKATDGFAPT 723
>06_03_0598 +
22621765-22624795,22624903-22625066,22625290-22625328,
22625479-22625487
Length = 1080
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 6 RCQ*RPGGNQRSPHKMSDLSKNDIERASFAFSIYDFEGKGKIDAYNLGDL 155
R Q +P Q + HK+ +++ DI +A+ FS + G G G+L
Sbjct: 794 RIQVKPNLPQCNEHKLKNITYEDIAKATNMFSPDNLIGSGSFAMVYKGNL 843
>10_07_0048 -
12354566-12354639,12355563-12355665,12355781-12355933,
12356105-12356132,12356414-12356450,12356563-12356746
Length = 192
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 93 AFSIYDFEGKGKIDAYNLGDLLRALNSNPT 182
AF ++D +G G ID L +RAL T
Sbjct: 52 AFDLFDTDGSGTIDPKELNVAMRALGFEMT 81
>02_05_0866 - 32331629-32334328
Length = 899
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 7 GASEDREGTNDHHTK*ATSARTTLKGHPS 93
G + G+N HT+ T+ TT+ G PS
Sbjct: 860 GIKQAMAGSNGDHTRSGTTTVTTMSGWPS 888
>01_07_0179 -
41814886-41815074,41815172-41815222,41815365-41815469,
41815852-41815945,41816056-41816150,41816581-41816700,
41816737-41816832,41817272-41817569,41817777-41817853,
41818932-41819447
Length = 546
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 93 AFSIYDFEGKGKIDAYNLGDLLRALNSNPTL 185
AF ++D +G G I A L +L L T+
Sbjct: 118 AFRVFDADGNGTISAAELARVLHGLGEKATV 148
>01_06_1559 +
38247463-38247499,38247711-38247747,38248181-38248276,
38248671-38248788,38248844-38248878,38249173-38249452,
38249701-38249820,38250369-38250620
Length = 324
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 97 KAKDALSMSFLLR-SLILCGDRWFPPGL 17
K K M FLL S+ LCG WF GL
Sbjct: 206 KTKSVEFMPFLLSLSVFLCGTSWFIYGL 233
>11_01_0464 + 3597568-3600244,3600345-3600742
Length = 1024
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 60 LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLR 161
+S ND+ RA+ FS+ + GKG+ G L +
Sbjct: 690 VSYNDLARATERFSMSNLIGKGRFSCVYQGKLFQ 723
>05_04_0127 - 18262499-18263104
Length = 201
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 93 AFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
AF ++D +G G I L +LR + T+A
Sbjct: 133 AFGVFDADGNGVITPAELARVLRGIGEAATVA 164
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 88 PSPSPSMISRAKARSM 135
PSPSPS SRAK R +
Sbjct: 32 PSPSPSTSSRAKPRKV 47
>01_07_0217 + 42072475-42072915
Length = 146
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 93 AFSIYDFEGKGKIDAYNLGDLLRALNSN 176
AF +Y+ EG+G+I +L +L L S+
Sbjct: 87 AFRMYEMEGEGRITPASLKRMLSKLGSH 114
>12_01_0503 -
3981603-3981730,3982858-3983023,3983057-3983139,
3983250-3983301,3983497-3983654,3983756-3985617,
3986029-3986093,3986176-3986340,3986836-3986893,
3987479-3987590,3987661-3987712,3988080-3988140,
3988220-3988377,3988705-3988787,3988897-3988945,
3989122-3989185,3990225-3990317,3990410-3990543,
3991364-3991585,3991815-3991937,3992103-3992267,
3993064-3993450
Length = 1479
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 67 RTTLKGHPSPSPSMISRAKARSMPTT 144
R+ K P PSP+ S A A + PTT
Sbjct: 827 RSVSKMPPLPSPAAASAAAAAAAPTT 852
>11_06_0304 - 22206490-22207065
Length = 191
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 51 MSDLSKND---IERASFAFSIYDFEGKGKIDAYNLGDLLRAL 167
MS+L +D ++ AF ++D + G IDA +L +LR L
Sbjct: 110 MSELFDDDEPSLDEVKQAFLVFDEDNDGYIDALDLYRVLRNL 151
>04_01_0252 - 3329712-3331061
Length = 449
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 17 KTGREPTIT-TQNERPQQERH*KGILRLLHL*FRGQRQDRCLQPR 148
K + PT T +QN+RPQ + K L + G CLQPR
Sbjct: 368 KDFQPPTPTPSQNDRPQTDSSAKKTLICYNCKEPGHYSRDCLQPR 412
>03_06_0660 -
35349264-35349375,35349914-35350017,35350211-35350368,
35350899-35350986,35352927-35353025,35353377-35353472,
35353591-35353628,35357960-35358285,35358600-35358796
Length = 405
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 17 KTGREPTITTQNERPQQERH 76
K G PT++ +RP Q RH
Sbjct: 69 KAGGRPTVSRNWQRPSQRRH 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,815,460
Number of Sequences: 37544
Number of extensions: 121254
Number of successful extensions: 384
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 14,793,348
effective HSP length: 63
effective length of database: 12,428,076
effective search space used: 260989596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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