Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A23
(256 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 37 0.002
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 37 0.002
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 37 0.002
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 35 0.009
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 35 0.009
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 35 0.009
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 34 0.012
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 34 0.012
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 34 0.012
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 34 0.012
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 34 0.016
U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light c... 34 0.016
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 34 0.016
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 34 0.016
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 34 0.016
AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical ... 31 0.11
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 29 0.35
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 27 1.4
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z79605-6|CAB01906.3| 323|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z38112-5|CAD36484.1| 134|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z35603-4|CAD36496.1| 134|Caenorhabditis elegans Hypothetical pr... 27 1.8
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 26 3.2
AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical... 26 3.2
Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical pr... 26 4.3
U40028-1|AAA81114.2| 392|Caenorhabditis elegans Fucosyl transfe... 26 4.3
L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calciu... 26 4.3
AJ745074-1|CAG32980.1| 392|Caenorhabditis elegans alpha1,3-fuco... 26 4.3
U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calciu... 25 5.6
U53341-7|AAC69111.3| 744|Caenorhabditis elegans Hypothetical pr... 25 5.6
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 25 7.4
Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical pr... 25 9.8
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 25 9.8
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 36.7 bits (81), Expect = 0.002
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 51 MSDLSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPT 182
+S L++ +I AF ++D +G G I LG +RAL NPT
Sbjct: 20 ISQLTEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPT 63
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 36.7 bits (81), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 51 MSD-LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
M+D L++ I AFS++D +G G I LG ++R+L NPT A
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 47
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 36.7 bits (81), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 51 MSD-LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
M+D L++ I AFS++D +G G I LG ++R+L NPT A
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 47
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 34.7 bits (76), Expect = 0.009
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 69 NDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLATV 194
+D+ F+ +D +G +I +GD+LRAL NPT A +
Sbjct: 2 DDLADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEI 43
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 34.7 bits (76), Expect = 0.009
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 60 LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPT 182
L++ +I AF ++D +G G I + LG +R+L NPT
Sbjct: 29 LNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPT 69
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 34.7 bits (76), Expect = 0.009
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 60 LSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPT 182
L++ +I AF ++D +G G I + LG +R+L NPT
Sbjct: 29 LNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPT 69
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 34.3 bits (75), Expect = 0.012
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 18 RPGGNQRSPHKMSDLSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPT 182
R G NQ + + +++ + AF ++D +G ++ LG+ +R L NPT
Sbjct: 3 RQGTNQSVCSDADEFTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPT 57
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 34.3 bits (75), Expect = 0.012
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 33 QRSPHKMSDLSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPT 182
Q S + L+ +I+ AF ++D +G G I LG +R+L NPT
Sbjct: 66 QFSEDIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPT 115
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 34.3 bits (75), Expect = 0.012
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +3
Query: 69 NDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNP 179
+++E F ++D +G GKIDA + ++LR+L+ NP
Sbjct: 5 DNMEECREVFMLFDKKGDGKIDAAQVFEVLRSLDENP 41
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 34.3 bits (75), Expect = 0.012
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 33 QRSPHKMSDLSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPT 182
Q S + L+ +I+ AF ++D +G G I LG +R+L NPT
Sbjct: 9 QFSEDIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPT 58
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 33.9 bits (74), Expect = 0.016
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 93 AFSIYDFEGKGKIDAYNLGDLLRALNSN 176
AF +YD EG G I+ +L D+LRAL+ N
Sbjct: 100 AFRLYDKEGNGYINVSDLRDILRALDDN 127
>U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light
chain protein 3, isoformb protein.
Length = 90
Score = 33.9 bits (74), Expect = 0.016
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 96 FSIYDFEGKGKIDAYNLGDLLRALNSNPTLATV 194
F++YD E GKID +GD+ RA PT A V
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMV 45
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 33.9 bits (74), Expect = 0.016
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 96 FSIYDFEGKGKIDAYNLGDLLRALNSNPTLATV 194
F++YD E GKID +GD+ RA PT A V
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMV 45
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 33.9 bits (74), Expect = 0.016
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 96 FSIYDFEGKGKIDAYNLGDLLRALNSNPTLATV 194
F++YD E GKID +GD+ RA PT A V
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMV 45
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 33.9 bits (74), Expect = 0.016
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 93 AFSIYDFEGKGKIDAYNLGDLLRALNSN 176
AF +YD EG G I+ +L D+LRAL+ N
Sbjct: 100 AFRLYDKEGNGYINVSDLRDILRALDDN 127
>AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical
protein W09G10.3 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.11
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 48 KMSDLSKNDIERASFAFSIYDFEGKGKID 134
+M + N RA FAF + D EGKG++D
Sbjct: 178 EMGNYHINSSARAQFAFQLMDEEGKGRVD 206
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 29.5 bits (63), Expect = 0.35
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 96 FSIYDFEGKGKIDAYNLGDLLRALNSNPTLA 188
F +D G GKID+ L LRA+ NPT A
Sbjct: 14 FHFHDTLGDGKIDSKQLPTALRAMMLNPTEA 44
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 42 PHKMSDLSKNDIERASFAFSIYDFEGK 122
P +SD S D+E F S++D EGK
Sbjct: 11 PMDISDASVADVESKDFLTSLFDCEGK 37
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical
protein T05H10.5a protein.
Length = 980
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 42 PHKMSDLSKNDIERASFAFSIYDFEGK 122
P +SD S D+E F S++D EGK
Sbjct: 11 PMDISDASVADVESKDFLTSLFDCEGK 37
>Z79605-6|CAB01906.3| 323|Caenorhabditis elegans Hypothetical
protein ZK678.4 protein.
Length = 323
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 151 IF*EHSTLTPH*LPSRNSVVQRRRARSNL 237
+F +H T+TP +P +N+ + + +AR +L
Sbjct: 191 VFSKHKTITPFAVPLQNTTLSKLQARRDL 219
>Z38112-5|CAD36484.1| 134|Caenorhabditis elegans Hypothetical
protein T02C12.4 protein.
Length = 134
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 45 HKMSDLSKNDIERASFAFSIYDFEGKGKIDAYNL 146
HK++++ K ++ A FA++ + E G + A NL
Sbjct: 100 HKLAEIKKLTLKNAPFAYTNTEVEQNGFVKASNL 133
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 45 HKMSDLSKNDIERASFAFSIYDFEGKGKIDAYNL 146
HK++++ K ++ A FA++ + E G + A NL
Sbjct: 775 HKLAEIKKLTLKNAPFAYTNTEVEQNGFVKASNL 808
>Z35603-4|CAD36496.1| 134|Caenorhabditis elegans Hypothetical
protein T02C12.4 protein.
Length = 134
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 45 HKMSDLSKNDIERASFAFSIYDFEGKGKIDAYNL 146
HK++++ K ++ A FA++ + E G + A NL
Sbjct: 100 HKLAEIKKLTLKNAPFAYTNTEVEQNGFVKASNL 133
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 67 RTTLKGHPSPS-PSMISRAKARSMPTT*VIF*EHSTLTPH*LPSRNSVVQRRRA 225
+T ++ SP+ P + S+ ++ P + +TP LPSRNS +Q+ A
Sbjct: 302 KTEVRTKSSPTNPIVNSKQPSQKKPADLTPHPKRPPITPETLPSRNSEIQKPAA 355
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 HKMSDLSKNDIERASFAFSIYDFEGKGKID-AYNLGDLLRALNSN 176
H M+ +S + A ++YDF G G+ + GD +R L N
Sbjct: 89 HDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYN 133
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 HKMSDLSKNDIERASFAFSIYDFEGKGKID-AYNLGDLLRALNSN 176
H M+ +S + A ++YDF G G+ + GD +R L N
Sbjct: 94 HDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYN 138
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 HKMSDLSKNDIERASFAFSIYDFEGKGKID-AYNLGDLLRALNSN 176
H M+ +S + A ++YDF G G+ + GD +R L N
Sbjct: 104 HDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYN 148
>AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical
protein Y43F8C.13 protein.
Length = 338
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 108 DFEGKGKIDAYNLGDLLRALNSNPTLATV 194
DFEG+GK + L D+LR N + TL T+
Sbjct: 106 DFEGEGKHASLALIDILRE-NRDATLVTI 133
>Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical
protein F10G8.5 protein.
Length = 190
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 78 ERASFAFSIYDFEGKGKIDAYNLGDLLRAL 167
++ +AF +YD +G G ID + ++ A+
Sbjct: 101 QKLEWAFRMYDIDGNGTIDEKEMIKIIEAI 130
>U40028-1|AAA81114.2| 392|Caenorhabditis elegans Fucosyl
transferase protein 6 protein.
Length = 392
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 71 VLAEVAHFVW*SLVPSRS 18
+ A VA FVW +LVP+RS
Sbjct: 22 IYASVALFVWYTLVPTRS 39
>L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 190
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 78 ERASFAFSIYDFEGKGKIDAYNLGDLLRAL 167
++ +AF +YD +G G ID + ++ A+
Sbjct: 101 QKLEWAFRMYDIDGNGTIDEKEMIKIIEAI 130
>AJ745074-1|CAG32980.1| 392|Caenorhabditis elegans
alpha1,3-fucosyltransferase protein.
Length = 392
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 71 VLAEVAHFVW*SLVPSRS 18
+ A VA FVW +LVP+RS
Sbjct: 22 IYASVALFVWYTLVPTRS 39
>U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 3 protein.
Length = 199
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 78 ERASFAFSIYDFEGKGKIDAYNLGDLLRALNS 173
E+ +AFS+YD + G I + D++ A+ S
Sbjct: 109 EKLDWAFSLYDVDKDGFITKDEMADIVDAIYS 140
>U53341-7|AAC69111.3| 744|Caenorhabditis elegans Hypothetical
protein F49E10.1 protein.
Length = 744
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 103 MEKAK-DALSMSFLLRSLILCGDRWFPPGLHWHL 5
+EK + DA+ + F+ R ++LC R FP H+
Sbjct: 600 LEKQRPDAMQLMFVHRWILLCFKREFPENYALHI 633
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/34 (23%), Positives = 20/34 (58%)
Frame = +2
Query: 155 FESTQL*PHISYRRETRWYKEEGREATYDLKSSF 256
F+S+Q PH++Y Y + ++++ ++S+
Sbjct: 347 FQSSQQFPHLNYSMNNSIYSDSSFQSSFSAENSY 380
>Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical
protein C26C6.4a protein.
Length = 424
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 172 LTPH*LPSRNSVVQRRRARSNLRFEE 249
L+PH L RN VV R L FE+
Sbjct: 42 LSPHILRQRNIVVTVNRVSKELSFED 67
>Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical
protein F23D12.5 protein.
Length = 867
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 66 KNDIERASFAFSIYDFEG 119
KN ++R A++++DFEG
Sbjct: 479 KNTVQRLGNAWAVFDFEG 496
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 66 KNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPT 182
KN IE AF+ +D G+I L ++ PT
Sbjct: 124 KNKIEEYKRAFNFFDANNDGRITIDELEKAMQKCGQKPT 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,499,720
Number of Sequences: 27780
Number of extensions: 94630
Number of successful extensions: 282
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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