Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A18
(299 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 57 3e-09
03_06_0479 + 34217170-34217172,34217337-34217786 53 4e-08
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 53 5e-08
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 51 1e-07
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 49 6e-07
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 49 6e-07
05_01_0103 + 686770-687017,687120-687270 43 4e-05
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 43 5e-05
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 42 1e-04
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 33 0.041
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 28 1.6
04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527 27 3.6
04_01_0190 - 2234038-2234674,2237128-2237665,2239294-2239378 27 3.6
01_03_0153 + 13255667-13255954,13258383-13258529,13258798-132589... 27 3.6
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 26 4.7
11_06_0685 - 26272928-26273110,26273186-26273257,26273339-262734... 26 6.3
11_06_0459 + 23830204-23830350,23830419-23830592,23830738-238308... 26 6.3
11_06_0276 - 21826458-21826640,21826716-21826787,21826869-218269... 26 6.3
05_06_0126 - 25834129-25834214,25834595-25834658,25836201-258365... 26 6.3
05_01_0088 + 581619-581854,581890-582035,583143-583263,583593-58... 26 6.3
04_01_0137 - 1549562-1550213,1553363-1553896,1554524-1554606 26 6.3
02_02_0260 + 8385014-8385279,8385695-8385809 26 6.3
10_06_0124 + 11013346-11013474,11013879-11013939,11014751-110148... 25 8.3
10_01_0001 - 22485-22526,23308-23436,24346-24473,24801-24862,253... 25 8.3
03_06_0040 + 31240164-31241102,31241280-31241897 25 8.3
02_04_0393 - 22581651-22582046,22582191-22582196 25 8.3
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 56.8 bits (131), Expect = 3e-09
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +1
Query: 85 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDV*TVGGRNAEYDSFLEDLQKGG 261
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ V G +D F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 262 TGECRYGLFEFE 297
+CRY +++F+
Sbjct: 69 -SDCRYAIYDFD 79
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 53.2 bits (122), Expect = 4e-08
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 88 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDV*TVGGRNAEYDSFLEDLQKGGT 264
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V VG R+A +D L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 265 GECRYGLFEFE 297
CRY +++ +
Sbjct: 65 --CRYAVYDHD 73
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 52.8 bits (121), Expect = 5e-08
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 85 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDV*TVGGRNAEYDSFLEDLQKGG 261
+SGV + D CK + E++ + HR++ F + ++ K+I V +G R Y+ F L +
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE-- 81
Query: 262 TGECRYGLFEFE 297
G+CR+ +++F+
Sbjct: 82 -GDCRFAIYDFD 92
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 51.2 bits (117), Expect = 1e-07
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 73 HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDV*TVGGRNAEYDSFLEDL 249
H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ V G YD FL L
Sbjct: 7 HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASL 66
Query: 250 QKGGTGECRYGLFEFE 297
+ +CRY L++F+
Sbjct: 67 PE---NDCRYALYDFD 79
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 49.2 bits (112), Expect = 6e-07
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 85 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDV*TVGGRNAEYDSFLEDLQKGG 261
ASG+ V D CK ++E+K + R++ F I + +Q+ V +G YD F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 262 TGECRYGLFEFE 297
ECRY +F+F+
Sbjct: 326 ASECRYAVFDFD 337
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 49.2 bits (112), Expect = 6e-07
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 85 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDV*TVGGRNAEYDSFLEDLQKGG 261
ASG+ V D CK + E+K + R++VF I ++ +Q+ V +G YD F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 262 TGECRYGLFEFE 297
ECRY +F+F+
Sbjct: 81 ADECRYAVFDFD 92
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 43.2 bits (97), Expect = 4e-05
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 94 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDV*TVGGRNAEYDSFLEDLQKGGTGE 270
+ V D CK + E+K + +R++++ I ++K+ + V VG YD F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 271 CRYGLFEFE 297
CRY +F+++
Sbjct: 58 CRYAIFDYD 66
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 94 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDV*TVGGRNAEYDSFLEDLQKGGTGE 270
+ V + K+ + E+K+ K HRYV+F I D + +I V G YD F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 271 CRYGLFEFE 297
CRY +++ +
Sbjct: 77 CRYAVYDLD 85
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 41.5 bits (93), Expect = 1e-04
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 91 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDV*TVGGRNAEYDSFLEDLQKGGTG 267
G+ V+D CK ++E+K + R++VF I D+ +I V +G Y+ F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 268 ECRYGLFEFE 297
ECRY +++ +
Sbjct: 70 ECRYAVYDLD 79
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 33.1 bits (72), Expect = 0.041
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 94 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDV*TVGGRNAEYDSFLEDL 249
+ V + K+ + E+ + K HRYV+F I D + +I V G YD F L
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL 92
>10_08_0472 -
18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 288 EETISAFSGAALLQVFEKAIVFGITSADGLDVD 190
+ET+ A ++FEK +V I+S DG D +
Sbjct: 541 QETVDAVHSEICGKLFEKVVVEAISSVDGYDTN 573
>04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527
Length = 281
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 137 KRIRNTATWCSTFATRNRSTSKPSADVM 220
+R+ WCS F T++R + + + DV+
Sbjct: 222 ERVIMLGLWCSAFETKHRPSMRQAMDVL 249
>04_01_0190 - 2234038-2234674,2237128-2237665,2239294-2239378
Length = 419
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 161 WCSTFATRNRSTSKPSADVM 220
WCS F T++R T + + DV+
Sbjct: 368 WCSAFETQHRPTMQKAMDVL 387
>01_03_0153 +
13255667-13255954,13258383-13258529,13258798-13258932,
13259344-13259461,13260925-13261049,13261407-13261532,
13261617-13261697,13262188-13262250,13262328-13262402,
13263439-13263517,13263627-13263727,13263952-13264065,
13264225-13264338,13264406-13264477,13264561-13264608
Length = 561
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 120 RFASVRYCHTRRHFLMLKHVKIAPLILTTPRQ 25
R A +R+C RR L L+ ++ P TPR+
Sbjct: 27 RPAELRFCGLRREALGLRSLRAPPRAAATPRK 58
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 172 IRDEKQIDV*TVGGR-NAEYDSFLEDLQKGGT 264
+RDEK++DV +GG ++SF Q+ T
Sbjct: 10 VRDEKKVDVAAIGGAPPIVFESFAPSTQRDST 41
>11_06_0685 -
26272928-26273110,26273186-26273257,26273339-26273425,
26273566-26273655,26273741-26273785,26273872-26274054,
26274333-26274392,26274521-26274703,26274779-26274907,
26275083-26275380,26275454-26275608,26275791-26275929,
26276015-26276096,26276167-26276285,26276367-26276494,
26276640-26276813,26276882-26277028
Length = 757
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = -3
Query: 288 EETISAFSGAALLQVFEKAIVFGITSADGLDVDLFLVANVE 166
++T+ +G L++ +EK + FG+TS+ + +D+ + A++E
Sbjct: 174 KQTVFIATGL-LVKEYEKLLSFGVTSSTEVFLDMEIPASME 213
>11_06_0459 +
23830204-23830350,23830419-23830592,23830738-23830865,
23830947-23831065,23831136-23831217,23831303-23831441,
23831624-23831778,23831852-23832149,23832325-23832453,
23832529-23832711,23832840-23832899,23832973-23833101,
23833177-23833359,23833446-23833490,23833576-23833665,
23833806-23833892,23833974-23834045,23834120-23834302
Length = 800
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = -3
Query: 288 EETISAFSGAALLQVFEKAIVFGITSADGLDVDLFLVANVE 166
++T+ +G L++ +EK + FG+TS+ + +D+ + A++E
Sbjct: 174 KQTVFIATGL-LVKEYEKLLSFGVTSSTEVFLDMEIPASME 213
>11_06_0276 -
21826458-21826640,21826716-21826787,21826869-21826955,
21827096-21827185,21827271-21827315,21827402-21827584,
21827660-21827788,21827862-21827921,21828050-21828232,
21828308-21828436,21828612-21828909,21828983-21829137,
21829320-21829458,21829544-21829625,21829696-21829814,
21829896-21830023,21830169-21830342,21830411-21830557
Length = 800
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = -3
Query: 288 EETISAFSGAALLQVFEKAIVFGITSADGLDVDLFLVANVE 166
++T+ +G L++ +EK + FG+TS+ + +D+ + A++E
Sbjct: 174 KQTVFIATGL-LVKEYEKLLSFGVTSSTEVFLDMEIPASME 213
>05_06_0126 -
25834129-25834214,25834595-25834658,25836201-25836521,
25836912-25837040,25837118-25837177,25837251-25837548,
25837622-25837776,25837959-25838097,25838185-25838266,
25838337-25838455,25838537-25838664,25838810-25838983,
25839052-25839203,25839393-25839425,25840362-25841331,
25841412-25841537
Length = 1011
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = -3
Query: 288 EETISAFSGAALLQVFEKAIVFGITSADGLDVDLFLVANVE 166
++T+ +G L++ +EK + FG+TS+ + +D+ + A++E
Sbjct: 552 KQTVFIATGL-LVKEYEKLLSFGVTSSTEVFLDMEIPASME 591
>05_01_0088 +
581619-581854,581890-582035,583143-583263,583593-583773,
583842-584015,584161-584288,584370-584488,584559-584640,
584726-584864,585047-585201,585275-585572,585748-585876,
585952-586134,586263-586322,586396-586524,586600-586782,
586869-586913,586999-587088,587229-587315,587397-587468,
587813-587887
Length = 943
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = -3
Query: 288 EETISAFSGAALLQVFEKAIVFGITSADGLDVDLFLVANVE 166
++T+ +G L++ +EK + FG+TS+ + +D+ + A++E
Sbjct: 353 KQTVFIATGL-LVKEYEKLLSFGVTSSTEVFLDMEIPASME 392
>04_01_0137 - 1549562-1550213,1553363-1553896,1554524-1554606
Length = 422
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 161 WCSTFATRNRSTSKPSADVM 220
WCS F T++R T + DV+
Sbjct: 352 WCSVFETKHRPTMLQAMDVL 371
>02_02_0260 + 8385014-8385279,8385695-8385809
Length = 126
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 152 TATWCSTFATRNRSTSKPSADVMPNTIAFSKTCRR 256
T TWCS F S +K + +M +A S + R
Sbjct: 84 TTTWCSLFKITKTSITKHGSALMDRALAGSWSTSR 118
>10_06_0124 +
11013346-11013474,11013879-11013939,11014751-11014838,
11017619-11017806,11017849-11018112,11018188-11018262,
11018263-11019698
Length = 746
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 137 KRIRNTATWCSTFATRNRSTSKPSA 211
K +R WC + RN+S S SA
Sbjct: 534 KNLRKVKIWCKSATKRNKSISLSSA 558
>10_01_0001 -
22485-22526,23308-23436,24346-24473,24801-24862,
25388-25585,25807-25898,26941-26994
Length = 234
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 299 YSNSKRPYLHSPVPPFCRSSRKLSYSALRPP 207
Y K P SP PP SS +S S PP
Sbjct: 50 YEELKPPSSPSPTPPSAASSASVSASPDTPP 80
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 185 NRSTSKPSADVMPNTIAFSKTCRRAAPE-NADM 280
NR + S V+ IA SKT RR AP+ + DM
Sbjct: 176 NRRLFELSLSVLMEAIAQSKTTRREAPDADTDM 208
>02_04_0393 - 22581651-22582046,22582191-22582196
Length = 133
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 94 VTVSDACKTTYEEIKKDKKHRYVVFY 171
V VSDA K EE KK ++ +V+Y
Sbjct: 69 VEVSDASKKKEEEAKKKEEKEELVYY 94
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,531,427
Number of Sequences: 37544
Number of extensions: 127328
Number of successful extensions: 403
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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