Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_A18
         (299 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY154463-1|AAO18159.1| 1029|Homo sapiens NALP8 protein.                29   2.7  
BC051687-1|AAH51687.1|  232|Homo sapiens KLF3 protein protein.         29   3.5  
BC030662-1|AAH30662.1|  345|Homo sapiens Kruppel-like factor 3 (...    29   3.5  
AF285837-1|AAK27329.1|  345|Homo sapiens basic Kruppel-like fact...    29   3.5  
AB024523-1|BAA92271.1|  345|Homo sapiens basic kruppel like fact...    29   3.5  
EF512550-1|ABP62932.1|  820|Homo sapiens neuroendocrine long coi...    28   6.2  
BC017354-1|AAH17354.1|  810|Homo sapiens janus kinase and microt...    28   6.2  
AF273057-1|AAM44460.1|  810|Homo sapiens CTCL tumor antigen HD-C...    28   6.2  
AB011127-1|BAA25481.2|  802|Homo sapiens KIAA0555 protein protein.     28   6.2  

>AY154463-1|AAO18159.1| 1029|Homo sapiens NALP8 protein.
          Length = 1029

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -3

Query: 222 GITSADGLDVDLFLVANVEHHVAVFLILFY-FFVCRFASVRYCHTRRHFLMLKHVKIAPL 46
           G+T+  G+ + L  +A  E H    L+ F  FF   F  + +    ++F +L HV I  L
Sbjct: 483 GVTAFLGMSI-LRRIAGEEDHYVFTLVTFQEFFAALFYVLCFPQRLKNFHVLSHVNIQRL 541

Query: 45  ILTTPR 28
           I  +PR
Sbjct: 542 I-ASPR 546


>BC051687-1|AAH51687.1|  232|Homo sapiens KLF3 protein protein.
          Length = 232

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 179 TRNRSTSKPSADVMPNTIAFSKTCRRAAPENADMVSSS 292
           T N+ +S PSA   P+++ F  + RRA+P    M SSS
Sbjct: 65  TVNKRSSPPSAGNSPSSLKFRSSHRRASP-GLSMPSSS 101


>BC030662-1|AAH30662.1|  345|Homo sapiens Kruppel-like factor 3
           (basic) protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 179 TRNRSTSKPSADVMPNTIAFSKTCRRAAPENADMVSSS 292
           T N+ +S PSA   P+++ F  + RRA+P    M SSS
Sbjct: 65  TVNKRSSPPSAGNSPSSLKFPSSHRRASP-GLSMPSSS 101


>AF285837-1|AAK27329.1|  345|Homo sapiens basic Kruppel-like factor
           protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 179 TRNRSTSKPSADVMPNTIAFSKTCRRAAPENADMVSSS 292
           T N+ +S PSA   P+++ F  + RRA+P    M SSS
Sbjct: 65  TVNKRSSPPSAGNSPSSLKFPSSHRRASP-GLSMPSSS 101


>AB024523-1|BAA92271.1|  345|Homo sapiens basic kruppel like factor
           protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 179 TRNRSTSKPSADVMPNTIAFSKTCRRAAPENADMVSSS 292
           T N+ +S PSA   P+++ F  + RRA+P    M SSS
Sbjct: 65  TVNKRSSPPSAGNSPSSLKFPSSHRRASP-GLSMPSSS 101


>EF512550-1|ABP62932.1|  820|Homo sapiens neuroendocrine long
           coiled-coil protein 1 protein.
          Length = 820

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 137 KRIRNTATWCSTFATRNRSTSKPSADVMPNTIAFSKTCRRAAPENADM 280
           KR+R T   C     RN+  +K + ++M +     +  +    EN++M
Sbjct: 314 KRVRETEKQCKPLLERNKCLAKRNDELMVSLQRMEEKLKAVTKENSEM 361


>BC017354-1|AAH17354.1|  810|Homo sapiens janus kinase and
           microtubule interacting protein 2 protein.
          Length = 810

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 137 KRIRNTATWCSTFATRNRSTSKPSADVMPNTIAFSKTCRRAAPENADM 280
           KR+R T   C     RN+  +K + ++M +     +  +    EN++M
Sbjct: 314 KRVRETEKQCKPLLERNKCLAKRNDELMVSLQRMEEKLKAVTKENSEM 361


>AF273057-1|AAM44460.1|  810|Homo sapiens CTCL tumor antigen
           HD-CL-04 protein.
          Length = 810

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 137 KRIRNTATWCSTFATRNRSTSKPSADVMPNTIAFSKTCRRAAPENADM 280
           KR+R T   C     RN+  +K + ++M +     +  +    EN++M
Sbjct: 314 KRVRETEKQCKPLLERNKCLAKRNDELMVSLQRMEEKLKAVTKENSEM 361


>AB011127-1|BAA25481.2|  802|Homo sapiens KIAA0555 protein protein.
          Length = 802

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 137 KRIRNTATWCSTFATRNRSTSKPSADVMPNTIAFSKTCRRAAPENADM 280
           KR+R T   C     RN+  +K + ++M +     +  +    EN++M
Sbjct: 317 KRVRETEKQCKPLLERNKCLAKRNDELMVSLQRMEEKLKAVTKENSEM 364


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,239,371
Number of Sequences: 237096
Number of extensions: 665381
Number of successful extensions: 1443
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)