Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A17
(306 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0232 + 14030821-14030904,14031029-14031374,14031475-140315... 146 2e-36
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179... 132 4e-32
07_03_0061 + 12972944-12973054,12974509-12974536,12974701-129748... 82 1e-16
02_04_0080 - 19529575-19529643,19529756-19529938,19530061-195302... 47 3e-06
06_03_0178 + 17594062-17595576 31 0.18
03_02_0259 - 6920472-6920579,6920744-6921022,6921115-6921390,692... 29 0.55
03_02_0260 - 6924532-6924757,6925443-6925546,6925729-6926007,692... 29 0.72
11_01_0274 - 2050667-2052115 27 2.9
06_01_0456 - 3249662-3249710,3249838-3250451,3250694-3250780,325... 27 3.8
03_02_0900 - 12262149-12262565,12262924-12263061,12263387-122634... 27 3.8
06_03_1127 - 27807784-27807963,27808362-27808460,27809076-278091... 26 5.1
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 26 5.1
05_04_0085 + 17790417-17790714,17791826-17791869,17793658-177937... 26 6.7
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 26 6.7
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 25 8.9
07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874 25 8.9
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 25 8.9
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 25 8.9
03_02_0693 - 10441253-10441294,10441404-10441511,10441594-104416... 25 8.9
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 25 8.9
01_06_1636 - 38800814-38800918,38801024-38801169,38801276-388013... 25 8.9
01_06_1221 - 35495427-35496542,35496650-35496839,35496988-354970... 25 8.9
01_01_0743 - 5763654-5766902 25 8.9
01_01_0407 - 3067071-3070085 25 8.9
>01_03_0232 +
14030821-14030904,14031029-14031374,14031475-14031599,
14031927-14032023,14032459-14032691,14032765-14032885,
14033319-14033374,14033630-14033703,14034193-14034239,
14034458-14034507,14034860-14034922,14035160-14035240,
14035517-14035627,14035714-14035789,14036216-14036358,
14036775-14036848,14037304-14037409,14037492-14037547,
14038272-14038378,14041150-14041598
Length = 832
Score = 146 bits (355), Expect = 2e-36
Identities = 64/98 (65%), Positives = 80/98 (81%)
Frame = +3
Query: 12 PLSKATDEFSMIEEYVRNTHAATHSSYTLDLEQVFKVVREGEDKRYKPFRKLHNRRLLWH 191
PL ++E+SMI+ Y+ NTH TH+SYT+D+ Q+FKV R GE +R++ F NR LLWH
Sbjct: 449 PLEVGSEEYSMIKTYLANTHGKTHTSYTVDVVQIFKVSRHGEMERFQKFATAGNRMLLWH 508
Query: 192 GSLVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADM 305
GS +TN+AGI+SQGLRIAPPEAPVTGYMFGKG+YFADM
Sbjct: 509 GSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADM 546
>01_03_0231 +
14014243-14014390,14015053-14015141,14017859-14017949,
14018088-14018215,14018703-14018784,14019022-14019081,
14019160-14019251,14019342-14019462,14019873-14019928,
14020193-14020272,14020774-14020820,14020940-14020989,
14021304-14021366,14021515-14021595,14021703-14021717,
14021875-14021985,14022072-14022147,14022350-14022492,
14022721-14022794,14023364-14023454,14023589-14023687
Length = 598
Score = 132 bits (320), Expect = 4e-32
Identities = 60/103 (58%), Positives = 78/103 (75%), Gaps = 5/103 (4%)
Frame = +3
Query: 12 PLSKATDEFSMIEE-----YVRNTHAATHSSYTLDLEQVFKVVREGEDKRYKPFRKLHNR 176
PL ++E+SM E Y+ NTH TH+ YT+D+ Q+FKV R GE +R++ F NR
Sbjct: 386 PLEVDSEEYSMARERKIKTYLTNTHGKTHTGYTVDIVQIFKVSRLGEMERFQKFASAGNR 445
Query: 177 RLLWHGSLVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADM 305
LLWHGS +TN+AGI+SQGLRIAPPEAP++G+MFGKG+YFADM
Sbjct: 446 MLLWHGSRLTNWAGILSQGLRIAPPEAPISGFMFGKGVYFADM 488
>07_03_0061 +
12972944-12973054,12974509-12974536,12974701-12974870,
12975878-12976043,12976122-12976425,12977155-12977350,
12977464-12977622,12978311-12978371,12978904-12978967,
12979099-12979346,12980039-12980250,12980344-12980456,
12980547-12980623,12980710-12980873,12981493-12981564,
12981565-12981760,12981813-12981854,12982358-12982440,
12982534-12982671,12982942-12983124,12983216-12983263
Length = 944
Score = 81.8 bits (193), Expect = 1e-16
Identities = 43/98 (43%), Positives = 60/98 (61%)
Frame = +3
Query: 12 PLSKATDEFSMIEEYVRNTHAATHSSYTLDLEQVFKVVREGEDKRYKPFRKLHNRRLLWH 191
PL +++ ++E+Y+ NTHA TH +Y+ ++ + V
Sbjct: 755 PLPHDCEDYKLVEKYLLNTHAPTHKAYST-IQTIVSV-------------------FFCI 794
Query: 192 GSLVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADM 305
GS +TN+ GI+SQGLRIAPPEAPVTGYMFGKG+YFAD+
Sbjct: 795 GSRLTNYVGILSQGLRIAPPEAPVTGYMFGKGLYFADL 832
>02_04_0080 -
19529575-19529643,19529756-19529938,19530061-19530210,
19530297-19530379,19530497-19530599,19530709-19530918,
19531023-19531183,19531275-19531351,19531483-19531610,
19531695-19531935,19532047-19532180,19532261-19532435,
19532587-19532656,19532746-19532803,19532887-19532994,
19533088-19533283,19533381-19533727,19534008-19534034,
19534334-19534336
Length = 840
Score = 46.8 bits (106), Expect = 3e-06
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +3
Query: 27 TDEFSMIEEYVRNTHAATHSS---YTLDLEQVFKVVREGEDKRYKPFRKLHNRRLLWHGS 197
++++ MI +Y+ T+ Y+ +E+++ V Y +KL N+ LLW G+
Sbjct: 623 SEDYKMILKYLEKTYEPVKVGDVVYSATVERIY-AVESSALPSYDEIKKLPNKVLLWCGT 681
Query: 198 LVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFAD 302
+N + G A PV GYMFGK I +D
Sbjct: 682 RSSNLLRHLRDGFVPAVCHIPVPGYMFGKAIVCSD 716
>06_03_0178 + 17594062-17595576
Length = 504
Score = 31.1 bits (67), Expect = 0.18
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = -3
Query: 286 PLPNMYPVTGASGGAMRRPCEMMPAKLVTNEPCQSSRLLCNFLNGLYRLSSPSRTTLNT 110
PLP+ PV G G A R K V N +SSR + L YR ++PS TT T
Sbjct: 427 PLPS--PVRG--GSASPRTFSPAAQKFVRNAIAKSSRTIDESLRASYRGTTPSATTPKT 481
>03_02_0259 -
6920472-6920579,6920744-6921022,6921115-6921390,
6921473-6921691,6921795-6921963,6922248-6922422,
6922490-6922601,6923343-6923573
Length = 522
Score = 29.5 bits (63), Expect = 0.55
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Frame = -3
Query: 172 LCNFLNGLYRLSSPSRTTLNT----------CSRSSV*EECVAACV-FLTYSSIIENSSV 26
LC +L Y L P +T+NT S E AC +L+ + N +
Sbjct: 382 LCKYLESFYTLRKPVASTINTLAGALYKVFCASTDQAKNEMREACFDYLSLGGVFSNGPI 441
Query: 25 ALLSG 11
ALLSG
Sbjct: 442 ALLSG 446
>03_02_0260 -
6924532-6924757,6925443-6925546,6925729-6926007,
6926093-6926368,6926460-6926678,6926758-6926926,
6927208-6927382,6927489-6927600,6929566-6929820
Length = 604
Score = 29.1 bits (62), Expect = 0.72
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Frame = -3
Query: 172 LCNFLNGLYRLSSPSRTTLNT----------CSRSSV*EECVAACV-FLTYSSIIENSSV 26
LC +L Y L P +T+NT S E AC +L+ + N +
Sbjct: 390 LCKYLESFYTLRKPVASTINTLAGALYKVFSASPDQARNEMRQACFDYLSLGGVFSNGPI 449
Query: 25 ALLSG 11
ALLSG
Sbjct: 450 ALLSG 454
>11_01_0274 - 2050667-2052115
Length = 482
Score = 27.1 bits (57), Expect = 2.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 239 HSSSGSARDRVHVWQRD 289
H +GSA++R+H++QRD
Sbjct: 263 HLVAGSAKERIHMFQRD 279
>06_01_0456 -
3249662-3249710,3249838-3250451,3250694-3250780,
3251509-3252384,3252445-3252534,3252645-3252696,
3253117-3253168,3253265-3253363,3253444-3253528,
3253620-3253668,3253749-3253816,3254417-3254482,
3255690-3255741,3256685-3256767,3256915-3256946,
3257271-3257466,3258542-3258607,3259797-3259869,
3260010-3260224
Length = 967
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 129 EGEDKRYKPFRKLHNRRLLWHGS-LVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFA 299
+G++++ + ++ RRL+ G L T+F G G + PP+ Y F +GI FA
Sbjct: 22 QGKEQQQQMAVAMNARRLVMIGDRLRTHFRG--GGGTVLEPPDLAHLVYAFARGIDFA 77
>03_02_0900 -
12262149-12262565,12262924-12263061,12263387-12263446,
12263557-12263619,12264181-12264243,12264420-12264482,
12265076-12265153,12265673-12266080
Length = 429
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 84 SSYTLDLEQVF--KVVREGEDKRYKPFRKLHNRRLLWH 191
S+ LD+ +++ K++ +DK + +KL + + LWH
Sbjct: 122 STVELDMHRLYEAKLILPMQDKLHDTIKKLEDEKSLWH 159
>06_03_1127 -
27807784-27807963,27808362-27808460,27809076-27809165,
27809272-27809404,27809539-27809624,27810028-27810099,
27810329-27810415,27810485-27810616,27810718-27810789,
27810957-27811037,27811871-27811963,27812298-27812465
Length = 430
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 12 PLSKATDEFSMIEEYVRNTHAATHSSYTLDLEQVFKVVREGEDKRYKP 155
P DE S++ +R+ AA E FKV EG KR++P
Sbjct: 92 PFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEG--KRFRP 137
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKAT-DEFSMIEEYVRNTHAATHSSYTLD 101
APL+K +EF ++E + HA T + T+D
Sbjct: 294 APLAKVVHEEFGIVEGLMTTVHATTATQKTVD 325
>05_04_0085 +
17790417-17790714,17791826-17791869,17793658-17793793,
17794315-17794391,17794646-17794706,17794707-17794924,
17795168-17795412,17796032-17796401,17796916-17797344
Length = 625
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 70 TQLRIPLTRSTLNRYSKWCVKARTNDTSHSGNCTTDDY 183
T + + T L+ + +W +AR H G TT DY
Sbjct: 438 TSVLLTWTLIVLSMHPEWQERAREEVLHHFGRTTTPDY 475
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 25.8 bits (54), Expect = 6.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 79 RIPLTRSTLNRYSKWCVKARTN 144
RI + R ++ Y KWC++ T+
Sbjct: 482 RIAVMRQVIDTYEKWCLRLSTS 503
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKAT-DEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F +IE + HA T + T+D
Sbjct: 183 APLAKVIHDNFGIIEGLMTTVHAITATQKTVD 214
>07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874
Length = 488
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 145 RLSSPSRTTLNTCSRSSV*EECV 77
R+SSP+ +L CSR+S EE +
Sbjct: 248 RISSPTLVSLGLCSRTSDMEELI 270
>05_03_0496 +
14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 147 YKPFRKLHNRRLLWHGSLVTNFAGIISQGLRIAPPEAPVTGY 272
++ FR+ RR W G LV +G + R APP P G+
Sbjct: 116 HRHFRRRRRRRQ-WDGRLVFGSSGASACCDRSAPPFPPRAGH 156
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F ++E + HA T + T+D
Sbjct: 208 APLAKVINDRFGIVEGLMTTVHAITATQKTVD 239
>03_02_0693 -
10441253-10441294,10441404-10441511,10441594-10441677,
10441765-10443062,10443111-10444804,10444890-10444957,
10445057-10445186,10445292-10445415,10445551-10445711,
10446714-10446868
Length = 1287
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 289 IPLPNMYPVTGASGGAMRRPCEMMPAK 209
+PLPN+ GAM++ ++PAK
Sbjct: 880 VPLPNISSFDWMLNGAMQKSLNVLPAK 906
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F ++E + HA T + T+D
Sbjct: 179 APLAKVINDRFGIVEGLMTTVHAITATQKTVD 210
>01_06_1636 -
38800814-38800918,38801024-38801169,38801276-38801381,
38801609-38801686,38801786-38801839,38801920-38801992,
38802059-38802183,38802268-38802357,38802447-38802526,
38802869-38802995,38803145-38803227,38803575-38803710
Length = 400
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = -3
Query: 208 LVTNEPCQSSRLLCNFLNGLYRLSSPSRTTLNTCSRSSV*EECVAACVF---LTYSSIIE 38
L ++E RL+ + NG +L + S C V EC A +T ++I
Sbjct: 215 LCSSEDLSGKRLMWSVFNGTVQLQNVSEVLPKDCLAKKVRTECFLATELVKSITAPTLIV 274
Query: 37 NSS 29
NS+
Sbjct: 275 NSA 277
>01_06_1221 -
35495427-35496542,35496650-35496839,35496988-35497061,
35497407-35497573,35497685-35498018
Length = 626
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 151 LYRLSSPSRTTLNTCSRSSV*EECVAACVFLTYS 50
L +L SP R T ++V + CV AC +TYS
Sbjct: 80 LDQLGSPGRPF--TRQENAVVQTCVVACASMTYS 111
>01_01_0743 - 5763654-5766902
Length = 1082
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 186 WHGSLVTNFAGIISQGLRIAP 248
WHG + FA + S+GL I P
Sbjct: 277 WHGKSIELFAKMWSEGLEINP 297
>01_01_0407 - 3067071-3070085
Length = 1004
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 174 CCAIS*MACIVCPRLHA 124
CCA+S C PRLH+
Sbjct: 238 CCALSGPICATLPRLHS 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,928,554
Number of Sequences: 37544
Number of extensions: 171031
Number of successful extensions: 531
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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