Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A17
(306 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribo... 123 2e-29
AC024200-15|AAF36011.1| 945|Caenorhabditis elegans Poly(adp-rib... 123 2e-29
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 56 5e-09
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 56 5e-09
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 56 5e-09
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 46 5e-06
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 46 5e-06
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 2.0
U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine rece... 27 2.0
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 27 2.0
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 27 2.6
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 27 2.6
AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical ... 27 2.6
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 27 3.4
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 27 3.4
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 26 4.5
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 26 4.5
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 26 4.5
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 26 4.5
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 26 4.5
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 26 4.5
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 26 4.5
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 26 4.5
Z83111-1|CAB05532.1| 331|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z77136-9|CAI91180.1| 474|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z77136-7|CAD54177.1| 472|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z77136-6|CAB00883.1| 488|Caenorhabditis elegans Hypothetical pr... 26 6.0
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 26 6.0
>AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-1 protein.
Length = 945
Score = 123 bits (297), Expect = 2e-29
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = +3
Query: 12 PLSKATDEFSMIEEYVRNTHAATHSSYTLDLEQVFKVVREGEDKRYKPFRKLHNRRLLWH 191
PL + D+++MI +Y++NTH ATH ++L + K+ R+ E ++K R + NRRLLWH
Sbjct: 732 PLQQGCDDWNMIHQYLKNTHGATHD-LKVELIDILKLNRDNESSKFK--RHIGNRRLLWH 788
Query: 192 GSLVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADM 305
GS NFAGI+ QGLRIAPPEAPV+GYMFGKG+YFADM
Sbjct: 789 GSGKMNFAGILGQGLRIAPPEAPVSGYMFGKGVYFADM 826
>AC024200-15|AAF36011.1| 945|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 1 protein.
Length = 945
Score = 123 bits (297), Expect = 2e-29
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = +3
Query: 12 PLSKATDEFSMIEEYVRNTHAATHSSYTLDLEQVFKVVREGEDKRYKPFRKLHNRRLLWH 191
PL + D+++MI +Y++NTH ATH ++L + K+ R+ E ++K R + NRRLLWH
Sbjct: 732 PLQQGCDDWNMIHQYLKNTHGATHD-LKVELIDILKLNRDNESSKFK--RHIGNRRLLWH 788
Query: 192 GSLVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADM 305
GS NFAGI+ QGLRIAPPEAPV+GYMFGKG+YFADM
Sbjct: 789 GSGKMNFAGILGQGLRIAPPEAPVSGYMFGKGVYFADM 826
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +3
Query: 141 KRYKPFRKLHNRRLLWHGSLVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFAD 302
++++PF N++ LWHG+ TN I+ G I PP A G +FG GIY AD
Sbjct: 2069 EKFEPFVNDDNQKFLWHGTKATNLMSILKNGFLIDPPSACKNGNLFGSGIYLAD 2122
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +3
Query: 141 KRYKPFRKLHNRRLLWHGSLVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFAD 302
++++PF N++ LWHG+ TN I+ G I PP A G +FG GIY AD
Sbjct: 2107 EKFEPFVNDDNQKFLWHGTKATNLMSILKNGFLIDPPSACKNGNLFGSGIYLAD 2160
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +3
Query: 141 KRYKPFRKLHNRRLLWHGSLVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFAD 302
++++PF N++ LWHG+ TN I+ G I PP A G +FG GIY AD
Sbjct: 2069 EKFEPFVNDDNQKFLWHGTKATNLMSILKNGFLIDPPSACKNGNLFGSGIYLAD 2122
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 46.0 bits (104), Expect = 5e-06
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3
Query: 174 RRLLWHGSLVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADM 305
+RLLWHG+ VTN I+ GL+ P G MFG G+YFA++
Sbjct: 381 KRLLWHGTRVTNVFSILMNGLQF--PVGDRCGLMFGNGVYFANV 422
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 46.0 bits (104), Expect = 5e-06
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3
Query: 174 RRLLWHGSLVTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADM 305
+RLLWHG+ VTN I+ GL+ P G MFG G+YFA++
Sbjct: 381 KRLLWHGTRVTNVFSILMNGLQF--PVGDRCGLMFGNGVYFANV 422
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 286 PLPNMYPVTGASGGAMRRPCEMMPAKLVTNEPCQSSRLLCN 164
P+P P + S GA+ + PAK VTN ++SR L N
Sbjct: 431 PIPEEAPSSSKSFGALESVNSLSPAKTVTN---RNSRSLSN 468
>U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine
receptor, class w protein115 protein.
Length = 367
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -2
Query: 188 PK*SSVVQFPEWLVSFVLAFTHHFEYLFKVERVRGMRSCVRVPHILFYHRELIS 27
PK S+++ SF ++ EY F +E + G+ SC + PH +F +L +
Sbjct: 158 PKASAIIIAGICATSFPVSVLKFLEYQF-IE-IEGLESCAKGPHHIFAVSDLFT 209
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 286 PLPNMYPVTGASGGAMRRPCEMMPAKLVTNEPCQSSRLLCN 164
P+P P + S GA+ + PAK VTN ++SR L N
Sbjct: 431 PIPEEAPSSSKSFGALESVNSLSPAKTVTN---RNSRSLSN 468
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 235 RPCEMMPAKLVTNEPCQSSRLLCNFLNGLYR 143
RP ++ V N+P + ++CN ++G YR
Sbjct: 801 RPPHLVQVLSVMNKPTDTRFIICNIISGNYR 831
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 235 RPCEMMPAKLVTNEPCQSSRLLCNFLNGLYR 143
RP ++ V N+P + ++CN ++G YR
Sbjct: 945 RPPHLVQVLSVMNKPTDTRFIICNIISGNYR 975
>AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical
protein C17A2.5 protein.
Length = 731
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 54 YVRNTHAATHSSYTLDLEQVFKVVREGEDKRYKPF 158
Y+ ++H+ + D+E+ K++ E+ R KPF
Sbjct: 227 YILSSHSEKRAETVEDVEECSKLIEHEENSRDKPF 261
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 45 IEEYVRNTHAATHSSYTLDLEQVFKVVREGEDKRYKPFRKLHNRRL 182
IEE+ RN H++ + L LE +E E+K K +L +RL
Sbjct: 586 IEEFKRNWHSSREAGERLQLE-----AKENEEKVLKVEEELQEKRL 626
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 3 TRAPLSKATDEFSMIEEYVRNTHAATHSSYTLDLEQVFKVVREGEDKRYKPFRKLHNRR 179
T+ DE +EE +T +SY LD+E+ + ++ G+ + K F+ L +R
Sbjct: 614 TKKTFGAEDDELEELEE-----GPSTITSYGLDIEKARQEIKSGDKEDRKRFKLLREQR 667
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 277 NMYPVTGASGGAMRRPCEM 221
N+ P +GASG +RRP +M
Sbjct: 19 NLRPSSGASGDRLRRPSQM 37
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 277 NMYPVTGASGGAMRRPCEM 221
N+ P +GASG +RRP +M
Sbjct: 19 NLRPSSGASGDRLRRPSQM 37
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F +IE + HA T + T+D
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHAVTATQKTVD 195
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F +IE + HA T + T+D
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHAVTATQKTVD 195
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F +IE + HA T + T+D
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHAVTATQKTVD 195
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F +IE + HA T + T+D
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHAVTATQKTVD 195
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F +IE + HA T + T+D
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHAVTATQKTVD 195
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F +IE + HA T + T+D
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHAVTATQKTVD 195
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F +IE + HA T + T+D
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHAVTATQKTVD 195
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F +IE + HA T + T+D
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHAVTATQKTVD 195
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 APLSKA-TDEFSMIEEYVRNTHAATHSSYTLD 101
APL+K D F +IE + HA T + T+D
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHAVTATQKTVD 195
>Z83111-1|CAB05532.1| 331|Caenorhabditis elegans Hypothetical
protein F57G8.1 protein.
Length = 331
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -2
Query: 149 VSFVLAFTHHFEYLFKVERVRGMRSCVRVPHILFYH 42
++ ++ F + L R G+RSC RV +I+ ++
Sbjct: 110 ITILVFFEERYHQLVNGHRSNGIRSCSRVIYIVIHY 145
>Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical
protein T07G12.4 protein.
Length = 485
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 154 HSGNCTTDDYFGTV 195
HSGN T DD FGT+
Sbjct: 381 HSGNKTIDDIFGTL 394
>Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical
protein T07G12.2 protein.
Length = 544
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 154 HSGNCTTDDYFGTV 195
HSGN T DD FGT+
Sbjct: 443 HSGNKTIDDIFGTL 456
>Z77136-9|CAI91180.1| 474|Caenorhabditis elegans Hypothetical
protein ZC376.7c protein.
Length = 474
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 91 TRSTLNRYSKWCVKARTNDTSHSGNCTTDDYFGTVH 198
T S LNR S R D+ S +DDYF H
Sbjct: 356 TSSRLNRKSATPTYLRRRDSERSWTPASDDYFPEEH 391
>Z77136-7|CAD54177.1| 472|Caenorhabditis elegans Hypothetical
protein ZC376.7b protein.
Length = 472
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 91 TRSTLNRYSKWCVKARTNDTSHSGNCTTDDYFGTVH 198
T S LNR S R D+ S +DDYF H
Sbjct: 354 TSSRLNRKSATPTYLRRRDSERSWTPASDDYFPEEH 389
>Z77136-6|CAB00883.1| 488|Caenorhabditis elegans Hypothetical
protein ZC376.7a protein.
Length = 488
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 91 TRSTLNRYSKWCVKARTNDTSHSGNCTTDDYFGTVH 198
T S LNR S R D+ S +DDYF H
Sbjct: 370 TSSRLNRKSATPTYLRRRDSERSWTPASDDYFPEEH 405
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 25.8 bits (54), Expect = 6.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 154 HSGNCTTDDYF 186
H GNCT D+YF
Sbjct: 2040 HDGNCTLDEYF 2050
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,406,518
Number of Sequences: 27780
Number of extensions: 144114
Number of successful extensions: 443
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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