Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_A15
         (153 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            19   5.6  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    19   7.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    19   7.5  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    18   9.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       18   9.9  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 93  KFLIPNNLWMIYNAIRN 143
           K + P++L  IY+ +RN
Sbjct: 210 KHMWPSDLRTIYSRVRN 226


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 75  LFFSNEK 95
           LFFSNEK
Sbjct: 120 LFFSNEK 126


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 75  LFFSNEK 95
           LFFSNEK
Sbjct: 120 LFFSNEK 126


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +2

Query: 131 CNSKRHI 151
           CN KRH+
Sbjct: 30  CNCKRHV 36


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 7/16 (43%), Positives = 7/16 (43%)
 Frame = -3

Query: 49  GCHFLXXXXXXKLDLV 2
           GCH L       LD V
Sbjct: 323 GCHILVATPGRLLDFV 338


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,326
Number of Sequences: 438
Number of extensions: 444
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 30
effective length of database: 133,203
effective search space used:  2664060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)