Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A14
(289 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G4.06c |adf1|cof1|cofilin|Schizosaccharomyces pombe|chr 1|... 50 9e-08
SPBC646.03 |||glutamyl-tRNA amidotransferase|Schizosaccharomyces... 27 0.72
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 26 0.95
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 26 1.2
SPBP26C9.03c |||iron ion transporter |Schizosaccharomyces pombe|... 26 1.2
SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual 25 2.2
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 25 2.9
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 24 3.8
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 24 5.0
SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po... 24 5.0
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch... 24 5.0
SPAC9G1.04 |oxa101|oxa1, oxa1-1, oxa1sp1|mitochondrial inner mem... 24 5.0
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 23 6.7
SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces ... 23 6.7
SPBC3E7.12c |chr1|cfh4|chitin synthase regulatory factor |Schizo... 23 6.7
SPAC22F8.07c |rtf1||replication termination factor Rtf1|Schizosa... 23 6.7
SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr... 23 6.7
SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit Alp4|... 23 6.7
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 23 8.8
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 23 8.8
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 23 8.8
SPCC1620.08 |||succinate-CoA ligase |Schizosaccharomyces pombe|c... 23 8.8
SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces pombe... 23 8.8
>SPAC20G4.06c |adf1|cof1|cofilin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 137
Score = 49.6 bits (113), Expect = 9e-08
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +2
Query: 62 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNVLYDSFLEDLQKGGTG 241
SGV VS C ++E+K K RYVVF + D K V + +D+FL DL +
Sbjct: 4 SGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEKKSTDKDFDTFLGDLPE---K 60
Query: 242 ECRYGLFDLEY 274
+CRY ++D E+
Sbjct: 61 DCRYAIYDFEF 71
>SPBC646.03 |||glutamyl-tRNA amidotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 471
Score = 26.6 bits (56), Expect = 0.72
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 98 YEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNVLYDSFLE 217
Y + K+ +Y + D K + ++ LYDSF+E
Sbjct: 5 YNNLLKEVAAKYASIILNDAKIKSLTSINSAEYLYDSFVE 44
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.2 bits (55), Expect = 0.95
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 163 LFLVANVEHHVAVFLILFY--FFVCRFASVRYCHTRRHFLMLKHVKIAPL 20
+F++A + + +F+IL FF+ R+ V Y T R L V +PL
Sbjct: 1031 VFVLAVICYSSPMFMILIVPLFFLYRYNQVYYTQTSRELKRLDSVTRSPL 1080
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 25.8 bits (54), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 265 IEETISAFSGAALLQVFEKAIV*DI 191
+E + +FSG L +FEK +V DI
Sbjct: 687 LESVLGSFSGLIELHLFEKLVVVDI 711
>SPBP26C9.03c |||iron ion transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 584
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 68 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGR 190
VT D KT + +K KH+ V YIR K +D +GGR
Sbjct: 113 VTNDDGTKTKVDSDEKKHKHKNVRDYIR-FKHVD---IGGR 149
>SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 366
Score = 25.0 bits (52), Expect = 2.2
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 71 TVSDACKTTYEEIKKDKKHRYV 136
TV D C + IK KH YV
Sbjct: 316 TVEDFCNNIHSSIKSQFKHAYV 337
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 24.6 bits (51), Expect = 2.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 186 DVMSYTIAFSKTCRRAAPENAD 251
D+ Y+IA + TCR+ +N+D
Sbjct: 607 DLTLYSIAVNSTCRQLFEDNSD 628
>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.2 bits (50), Expect = 3.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 92 FCKRPILSHQTPFFDVKTRKNCTTNFND 9
FC+ P L Q F+D+ K T +F++
Sbjct: 349 FCELPRLRKQWLFYDLMNAKTLTGSFDN 376
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 287 GTDACIPNRRDHICILRCRPS 225
G D CI R+ C +RC PS
Sbjct: 570 GLDQCILLIRESNCFVRCFPS 590
>SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 434
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = -2
Query: 273 YSKSKRPYLHSPVPPFCRSSRKLSYKTLRPPTVSTS 166
Y+KS++ ++ S P C + + LS ++ T +T+
Sbjct: 289 YAKSQKKWIQSRFLPMCLAQQDLSPSSILFSTTNTT 324
>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 23.8 bits (49), Expect = 5.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 156 RNRSTSKPSADVMSYTIAFSKTCRRAAPENADMVSSIWNTRISA 287
+N S S +A + + S + A P N+ V + NT ISA
Sbjct: 148 KNSSKSSRAAQSAAAELISSSSITGARPANSTSVPNAVNTEISA 191
>SPAC9G1.04 |oxa101|oxa1, oxa1-1, oxa1sp1|mitochondrial inner
membrane translocase Oxa101|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 374
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 74 VSDACKTTYEEIKKDKKHRYV 136
V D KT YE+++KD R V
Sbjct: 322 VRDGFKTQYEQLQKDVSRRAV 342
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 23.4 bits (48), Expect = 6.7
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 89 KTTYEEI-KKDKKHRYVVFYIRDEKQIDVET 178
K Y++I +K+ + Y+++EKQID+ T
Sbjct: 4 KINYKDITQKEMFNEIFKEYVKEEKQIDLGT 34
>SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 23.4 bits (48), Expect = 6.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -1
Query: 145 VEHHVAVFLILFYFFVCRFASVRYCHTRRH 56
+ H V +I+ YF CR + Y + H
Sbjct: 412 IGHRVITRIIIAYFLGCRREDIAYLNVPLH 441
>SPBC3E7.12c |chr1|cfh4|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 456
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 120 RNTATWCSTFATRNRSTSKPSADVMSYTIAFSKT 221
R++++W + + + SKPS S +FSK+
Sbjct: 122 RSSSSWSAKLSRFTKHASKPSLSSNSSDSSFSKS 155
>SPAC22F8.07c |rtf1||replication termination factor
Rtf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 466
Score = 23.4 bits (48), Expect = 6.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 59 ASGVTVSDACKTTYEEIKK 115
A+ + +DACK+ +E IKK
Sbjct: 401 ANHLWTADACKSHFERIKK 419
>SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 382
Score = 23.4 bits (48), Expect = 6.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 21 SGAIFTCFNIKKWRLV*QYRTLA 89
+G +F NIKKWRL +LA
Sbjct: 282 AGYVFIEANIKKWRLAPAVGSLA 304
>SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit
Alp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 94 RFASVRYCHTRRHFLMLKHVKI 29
R A +RY R+FL+L+HV++
Sbjct: 582 RKAIIRYQLLFRYFLLLRHVEM 603
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 23.0 bits (47), Expect = 8.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 115 LFYFFVCRFASVRYCHTRRHFLMLKHVKIAPLIL 14
LF+FF+C + + + H L L + PL+L
Sbjct: 156 LFFFFLCVCVFLSFLFSLSHLLSLA-ILFLPLLL 188
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 23.0 bits (47), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 173 ETVGGRNVLYDSFLEDLQK--GGTGE 244
+ VGG++ L + L DLQK G T E
Sbjct: 174 DLVGGKSTLQNEILGDLQKEFGATPE 199
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 23.0 bits (47), Expect = 8.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 172 DVDLFLVANVEHHVAVFLILFYFFVCRFASVRYCHT 65
+ ++ L A V +F+ F+F++CR V + HT
Sbjct: 20 NTEILLFALVIILSVIFINFFFFYLCR-CCVYFYHT 54
>SPCC1620.08 |||succinate-CoA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 433
Score = 23.0 bits (47), Expect = 8.8
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 89 KTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRN 193
K Y I D++++ + D+ +D+ETV N
Sbjct: 135 KEYYFAILMDRENQCPMIVASDQGGVDIETVAAEN 169
>SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 426
Score = 23.0 bits (47), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 13 LKLVVQFLRVLTSKNGVWCDSIGRLQND 96
L L+ F V+ K+ VWCDS+ L D
Sbjct: 280 LPLLKAFKDVIGLKD-VWCDSLQTLHGD 306
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,169,407
Number of Sequences: 5004
Number of extensions: 20065
Number of successful extensions: 90
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 67723590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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