Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A14
(289 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 60 3e-10
03_06_0479 + 34217170-34217172,34217337-34217786 57 2e-09
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 55 1e-08
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 54 2e-08
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 52 7e-08
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 51 1e-07
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 50 4e-07
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 49 7e-07
05_01_0103 + 686770-687017,687120-687270 48 1e-06
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 36 0.007
02_05_0847 + 32183249-32183486,32184001-32184118,32184231-321843... 30 0.26
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 30 0.26
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 28 1.1
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 27 3.2
04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527 27 3.2
04_01_0190 - 2234038-2234674,2237128-2237665,2239294-2239378 27 3.2
10_01_0001 - 22485-22526,23308-23436,24346-24473,24801-24862,253... 26 4.2
06_01_0769 - 5745324-5746970 26 4.2
03_02_0197 + 6337212-6337278,6339261-6340517,6340599-6340626,634... 26 4.2
08_02_0193 - 14073103-14073246,14073332-14073481,14073571-140736... 26 5.6
08_01_0198 + 1625893-1626795 26 5.6
07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299 26 5.6
04_01_0137 - 1549562-1550213,1553363-1553896,1554524-1554606 26 5.6
03_01_0563 + 4169144-4169516,4170362-4170648,4171339-4171576,417... 26 5.6
10_06_0124 + 11013346-11013474,11013879-11013939,11014751-110148... 25 7.4
10_06_0008 - 9533424-9533475,9533526-9535344,9535599-9536364,955... 25 7.4
08_01_0383 - 3405986-3407359,3409283-3410827 25 7.4
04_03_0497 + 16566601-16566696,16567026-16567102,16567903-165680... 25 7.4
02_05_0374 + 28381456-28381785,28382302-28382555,28382665-283827... 25 7.4
02_04_0393 - 22581651-22582046,22582191-22582196 25 7.4
02_02_0260 + 8385014-8385279,8385695-8385809 25 7.4
05_06_0150 - 25994562-25995980 25 9.8
04_03_0821 - 20030123-20030250,20030551-20030815,20030912-20032081 25 9.8
04_01_0197 + 2323790-2324098,2324145-2324774 25 9.8
03_06_0040 + 31240164-31241102,31241280-31241897 25 9.8
02_05_1272 + 35373843-35374031,35374343-35374490,35374586-353747... 25 9.8
02_01_0279 - 1860410-1860508,1861536-1861889,1862660-1862805,186... 25 9.8
01_06_1550 + 38191957-38192054,38193084-38193284,38193456-381940... 25 9.8
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 60.1 bits (139), Expect = 3e-10
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +2
Query: 59 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNVLYDSFLEDLQKGG 235
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G +D F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 236 TGECRYGLFDLEYT--HQCQ 289
+CRY ++D ++ CQ
Sbjct: 69 -SDCRYAIYDFDFVTEENCQ 87
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 57.2 bits (132), Expect = 2e-09
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 62 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNVLYDSFLEDLQKGGT 238
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+ +D L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 239 GECRYGLFDLEYT 277
CRY ++D ++T
Sbjct: 65 --CRYAVYDHDFT 75
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 54.8 bits (126), Expect = 1e-08
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 59 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNVLYDSFLEDLQKGG 235
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G R Y+ F L +
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE-- 81
Query: 236 TGECRYGLFDLEY 274
G+CR+ ++D ++
Sbjct: 82 -GDCRFAIYDFDF 93
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 47 HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGGRNVLYDSFLEDL 223
H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G YD FL L
Sbjct: 7 HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASL 66
Query: 224 QKGGTGECRYGLFDLEY 274
+ +CRY L+D ++
Sbjct: 67 PE---NDCRYALYDFDF 80
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 52.0 bits (119), Expect = 7e-08
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +2
Query: 59 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNVLYDSFLEDLQKGG 235
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G YD F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 236 TGECRYGLFDLEYT--HQCQ 289
ECRY +FD ++ CQ
Sbjct: 326 ASECRYAVFDFDFVTDENCQ 345
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 51.2 bits (117), Expect = 1e-07
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 59 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNVLYDSFLEDLQKGG 235
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G YD F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 236 TGECRYGLFDLEYT--HQCQ 289
ECRY +FD ++ CQ
Sbjct: 81 ADECRYAVFDFDFVTDENCQ 100
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 49.6 bits (113), Expect = 4e-07
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 68 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGGRNVLYDSFLEDLQKGGTGE 244
+ V + K+ + E+K+ K HRYV+F I D + +I VE G YD F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 245 CRYGLFDLEY 274
CRY ++DL++
Sbjct: 77 CRYAVYDLDF 86
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 48.8 bits (111), Expect = 7e-07
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +2
Query: 65 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNVLYDSFLEDLQKGGTG 241
G+ V+D CK ++E+K + R++VF I D+ +I VE +G Y+ F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 242 ECRYGLFDLEYT--HQCQ 289
ECRY ++DL++ CQ
Sbjct: 70 ECRYAVYDLDFVTDENCQ 87
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 48.0 bits (109), Expect = 1e-06
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +2
Query: 68 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGGRNVLYDSFLEDLQKGGTGE 244
+ V D CK + E+K + +R++++ I ++K+ + VE VG + YD F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 245 CRYGLFDLEYT--HQCQ 289
CRY +FD ++ CQ
Sbjct: 58 CRYAIFDYDFVTEENCQ 74
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 35.5 bits (78), Expect = 0.007
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 68 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGGRNVLYDSFLEDL 223
+ V + K+ + E+ + K HRYV+F I D + +I VE G YD F L
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL 92
>02_05_0847 +
32183249-32183486,32184001-32184118,32184231-32184376,
32184591-32186080
Length = 663
Score = 30.3 bits (65), Expect = 0.26
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 279 CVYSKSKRPYLHSPVPPFCRSSRKLSYKTLRP 184
CV S S P LHSP CR+ +++ T++P
Sbjct: 615 CVRSTSVEPCLHSPPILSCRAKKEVDAATVKP 646
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 30.3 bits (65), Expect = 0.26
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 146 IRDEKQIDVETVGGR-NVLYDSFLEDLQKGGT 238
+RDEK++DV +GG ++++SF Q+ T
Sbjct: 10 VRDEKKVDVAAIGGAPPIVFESFAPSTQRDST 41
>10_08_0472 -
18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 262 EETISAFSGAALLQVFEKAIV*DITSADGFDVD 164
+ET+ A ++FEK +V I+S DG+D +
Sbjct: 541 QETVDAVHSEICGKLFEKVVVEAISSVDGYDTN 573
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 270 SKSKRPYLHSPVPPFCRSSRKLSYKTLRPPTVSTS 166
S+S P+ P P R S S KTL PP S S
Sbjct: 173 SRSSPPFALQPPTPSWRPSTPPSAKTLTPPRRSPS 207
>04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527
Length = 281
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 111 KRIRNTATWCSTFATRNRSTSKPSADVM 194
+R+ WCS F T++R + + + DV+
Sbjct: 222 ERVIMLGLWCSAFETKHRPSMRQAMDVL 249
>04_01_0190 - 2234038-2234674,2237128-2237665,2239294-2239378
Length = 419
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 135 WCSTFATRNRSTSKPSADVM 194
WCS F T++R T + + DV+
Sbjct: 368 WCSAFETQHRPTMQKAMDVL 387
>10_01_0001 -
22485-22526,23308-23436,24346-24473,24801-24862,
25388-25585,25807-25898,26941-26994
Length = 234
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 273 YSKSKRPYLHSPVPPFCRSSRKLSYKTLRPPTVSTS 166
Y + K P SP PP SS +S PP + S
Sbjct: 50 YEELKPPSSPSPTPPSAASSASVSASPDTPPAAAAS 85
>06_01_0769 - 5745324-5746970
Length = 548
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 279 CVYSKSKRPYLHSPVPPFCRSSR 211
C S P LHSP P CR+ R
Sbjct: 501 CARPASVEPCLHSPPPLVCRARR 523
>03_02_0197 +
6337212-6337278,6339261-6340517,6340599-6340626,
6340735-6340897
Length = 504
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 197 LYDSFLEDLQKGGTGECRYGLFDL 268
+Y+ + ED + G T E +GLFD+
Sbjct: 315 IYELYDEDTRPGSTSEKYWGLFDM 338
>08_02_0193 -
14073103-14073246,14073332-14073481,14073571-14073640,
14073900-14074021,14074260-14074395,14074492-14074967
Length = 365
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = -2
Query: 255 PYLHSPVPPFCRSSRKLSYKTLRPPTVSTSICFSSRM*NTT*RCFLSFFISSYVVLQASD 76
PY P PP CR R+ S+ PP +S + R L S Y L S
Sbjct: 48 PYFAPPPPPLCR--RRRSWPPPPPPPRVSSSSYVGR------GILLPATFSIYSPLSTSS 99
Query: 75 TVTPD 61
+ +PD
Sbjct: 100 SASPD 104
>08_01_0198 + 1625893-1626795
Length = 300
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 131 YVVFYIRDEKQIDVETVGGRN--VLYDSFLEDLQKGGTGE 244
+V F + D+ ++ T G +L+DS EDL GTGE
Sbjct: 82 HVEFRLLDQAAGEMVTFFGEKDPILFDSGSEDLSTWGTGE 121
>07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299
Length = 498
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 197 LYDSFLEDLQKGGTGECRYGLF 262
+Y+ F EDL+ G E +GLF
Sbjct: 343 IYELFNEDLRPGPVSEANWGLF 364
>04_01_0137 - 1549562-1550213,1553363-1553896,1554524-1554606
Length = 422
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 135 WCSTFATRNRSTSKPSADVM 194
WCS F T++R T + DV+
Sbjct: 352 WCSVFETKHRPTMLQAMDVL 371
>03_01_0563 +
4169144-4169516,4170362-4170648,4171339-4171576,
4172473-4172796,4172914-4172999,4173124-4173231,
4173315-4173619,4173733-4173960,4174109-4174877
Length = 905
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 264 SKRPYLHSPVPPFCRSSRKLSYKTLR 187
S +PYL S PP R R+ K LR
Sbjct: 218 SNKPYLPSETPPGLRELREKELKDLR 243
>10_06_0124 +
11013346-11013474,11013879-11013939,11014751-11014838,
11017619-11017806,11017849-11018112,11018188-11018262,
11018263-11019698
Length = 746
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 111 KRIRNTATWCSTFATRNRSTSKPSA 185
K +R WC + RN+S S SA
Sbjct: 534 KNLRKVKIWCKSATKRNKSISLSSA 558
>10_06_0008 -
9533424-9533475,9533526-9535344,9535599-9536364,
9551969-9552097
Length = 921
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 261 KRPYLHSPVPPFCRSSRKLSYKTLRPPTVSTS 166
+ P H+ PP + S+ + +RPPT S+S
Sbjct: 375 QNPPQHNAPPPPPQHSKLAEFLRIRPPTFSSS 406
>08_01_0383 - 3405986-3407359,3409283-3410827
Length = 972
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2
Query: 273 YSKSKRPYLHSPV 235
YSKSK Y+HSP+
Sbjct: 804 YSKSKSDYVHSPI 816
>04_03_0497 +
16566601-16566696,16567026-16567102,16567903-16568047,
16568265-16568309,16568338-16569294,16569603-16569896,
16571129-16571242,16571826-16571913,16571995-16572050,
16572250-16572304,16572417-16572460
Length = 656
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 167 DVETVGGRNVLYDSFLEDLQ 226
DVE++G RN++ S++ D +
Sbjct: 434 DVESLGNRNIILPSYIHDAE 453
>02_05_0374 +
28381456-28381785,28382302-28382555,28382665-28382773,
28383272-28383410,28383525-28383582,28384179-28384196,
28384301-28384423,28384483-28384681,28384763-28384796,
28385044-28385153
Length = 457
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 104 EIKKDKKHRYVVFYIRDEKQIDVETVGGRNVLYDSFLEDLQKG 232
E+K KH + +I +E+ + +G ++ D L+ L+ G
Sbjct: 151 EVKPVLKHSVIAVFIANEENSLITGIGVDGLVKDGLLDKLKNG 193
>02_04_0393 - 22581651-22582046,22582191-22582196
Length = 133
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 68 VTVSDACKTTYEEIKKDKKHRYVVFY 145
V VSDA K EE KK ++ +V+Y
Sbjct: 69 VEVSDASKKKEEEAKKKEEKEELVYY 94
>02_02_0260 + 8385014-8385279,8385695-8385809
Length = 126
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 126 TATWCSTFATRNRSTSKPSADVMSYTIAFSKTCRR 230
T TWCS F S +K + +M +A S + R
Sbjct: 84 TTTWCSLFKITKTSITKHGSALMDRALAGSWSTSR 118
>05_06_0150 - 25994562-25995980
Length = 472
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 104 EIKKDKKHRYVVFYIRDEKQIDVETVGGRNVLYDSFLEDLQK 229
E ++ +K R + RD ++ G V +D F+ DL+K
Sbjct: 422 EAEEGRKLRERLVETRDMALDAIKEAGSSEVAFDEFMRDLEK 463
>04_03_0821 - 20030123-20030250,20030551-20030815,20030912-20032081
Length = 520
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 287 GTDACIPNRRDHICILRCRPSAGL 216
GTD CI N D +L PS+G+
Sbjct: 311 GTDLCILNLGDSRAVLASVPSSGM 334
>04_01_0197 + 2323790-2324098,2324145-2324774
Length = 312
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 261 KRPYLHSPVPPFCRSSRKLSYKTLRPPTVSTS 166
+ P H+ PP + S+ + +RPPT S+S
Sbjct: 66 QNPPQHNAPPPPPQHSKLAEFFRIRPPTFSSS 97
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 25.0 bits (52), Expect = 9.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 159 NRSTSKPSADVMSYTIAFSKTCRRAAPE-NADM 254
NR + S V+ IA SKT RR AP+ + DM
Sbjct: 176 NRRLFELSLSVLMEAIAQSKTTRREAPDADTDM 208
>02_05_1272 +
35373843-35374031,35374343-35374490,35374586-35374704,
35374992-35375121,35375122-35375201
Length = 221
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 75 YRTLAKRHTKK*KRIRNTATWCSTFATRNRSTSKPSA 185
Y + + H R+R+T W S + NR PS+
Sbjct: 112 YLAIIEYHKPTKPRVRHTRPWSSCTKSSNRGNFHPSS 148
>02_01_0279 -
1860410-1860508,1861536-1861889,1862660-1862805,
1862885-1862925,1863010-1863173,1863217-1863281,
1863410-1863670,1863754-1863817,1863946-1864006,
1864112-1864473
Length = 538
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/46 (26%), Positives = 17/46 (36%)
Frame = +2
Query: 143 YIRDEKQIDVETVGGRNVLYDSFLEDLQKGGTGECRYGLFDLEYTH 280
Y+ + QID GGR F + G R ++E H
Sbjct: 229 YLNTDHQIDDNVFGGRQCKSSGFSPSVDGDGLSRYRTDFHEIEVIH 274
>01_06_1550 +
38191957-38192054,38193084-38193284,38193456-38194090,
38194398-38195419
Length = 651
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 272 IPNRRDHICILRCRPSAGL 216
+P + H C+LR R AGL
Sbjct: 567 MPKKLQHYCLLRSRQKAGL 585
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,485,705
Number of Sequences: 37544
Number of extensions: 126423
Number of successful extensions: 434
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 304131700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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