Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_A14
         (289 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   3.0  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   3.0  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   4.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   7.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    19   9.2  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    19   9.2  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   9.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   9.2  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 240 PVPPFCRSSRKL 205
           P PPFC  + KL
Sbjct: 82  PSPPFCEKNPKL 93


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 240 PVPPFCRSSRKL 205
           P PPFC  + KL
Sbjct: 83  PSPPFCEKNPKL 94


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 16/57 (28%), Positives = 21/57 (36%)
 Frame = +2

Query: 83  ACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNVLYDSFLEDLQKGGTGECRY 253
           +C        K+K  RY   Y   EK ++  T   R   Y    E  QK    E +Y
Sbjct: 3   SCSKDRNREYKEKDRRYEKLYNEKEKLLEERTSRKR---YSRSREREQKSYKNERKY 56


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 52  LMLKHVKIAPLILT 11
           L LKH++ A L+LT
Sbjct: 64  LNLKHLRAAVLVLT 77


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 133 VAVFLILFYFFVCRFASVRYCHT 65
           + VFLI +  F C      YC T
Sbjct: 278 MGVFLICWVPFFCVNIVTSYCKT 300


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 64  WCDSIGRLQNDIRRNKK 114
           W   +GR+   I RN+K
Sbjct: 390 WSRVLGRVHATIERNEK 406


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 243 NADMVSSIWNTRISA 287
           N D+ +  WN +ISA
Sbjct: 376 NNDLDTKKWNNKISA 390



 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 71  TVSDACKTTYEEIKKDK 121
           TV +AC     EI KDK
Sbjct: 480 TVENACVLKNTEIFKDK 496


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -2

Query: 255 PYLHSPVPPFCRSSRKLSYKTLRPPTVSTSI 163
           P   S   P   +  ++  + L PP  STS+
Sbjct: 73  PAFSSSCDPVPGNLEQIGSRPLHPPASSTSL 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,315
Number of Sequences: 438
Number of extensions: 1170
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)