Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_A05
         (312 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    65   2e-11
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    65   2e-11
AY119586-1|AAM50240.1|  719|Drosophila melanogaster LD15094p pro...    49   1e-06
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P...    49   1e-06
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P...    49   1e-06
AF145678-1|AAD38653.1|  641|Drosophila melanogaster BcDNA.LD2267...    27   6.5  
AE013599-90|AAF57325.2|  683|Drosophila melanogaster CG1344-PA p...    27   6.5  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 65.3 bits (152), Expect = 2e-11
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = +2

Query: 173  IGLGSKYGLMAFCTSKLEVCYFEVNGFYLGKLRGLLGDGNNEPYDD 310
            I L S+YG+   CTS L+VC+  +NGFY  K RGLLG+GN EPYDD
Sbjct: 2880 IHLYSEYGVGIVCTSDLKVCHININGFYTSKTRGLLGNGNAEPYDD 2925


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 65.3 bits (152), Expect = 2e-11
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = +2

Query: 173  IGLGSKYGLMAFCTSKLEVCYFEVNGFYLGKLRGLLGDGNNEPYDD 310
            I L S+YG+   CTS L+VC+  +NGFY  K RGLLG+GN EPYDD
Sbjct: 2880 IHLYSEYGVGIVCTSDLKVCHININGFYTSKTRGLLGNGNAEPYDD 2925


>AY119586-1|AAM50240.1|  719|Drosophila melanogaster LD15094p
           protein.
          Length = 719

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = +2

Query: 209 CTSKLEVCYFEVNGFYLGKLRGLLGDGNNEPYDD 310
           C  + ++C+FEV+G+Y G+  GLLG  NNEPYD+
Sbjct: 255 CNVQFDLCWFEVSGWYFGRTAGLLGTLNNEPYDE 288


>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
            isoform A protein.
          Length = 4345

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = +2

Query: 209  CTSKLEVCYFEVNGFYLGKLRGLLGDGNNEPYDD 310
            C  + ++C+FEV+G+Y G+  GLLG  NNEPYD+
Sbjct: 3881 CNVQFDLCWFEVSGWYFGRTAGLLGTLNNEPYDE 3914


>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
            isoform B protein.
          Length = 4374

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = +2

Query: 209  CTSKLEVCYFEVNGFYLGKLRGLLGDGNNEPYDD 310
            C  + ++C+FEV+G+Y G+  GLLG  NNEPYD+
Sbjct: 3910 CNVQFDLCWFEVSGWYFGRTAGLLGTLNNEPYDE 3943


>AF145678-1|AAD38653.1|  641|Drosophila melanogaster BcDNA.LD22679
           protein.
          Length = 641

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -1

Query: 198 NPYLEPRPIRPLVCLNA--NTSFSMTGKPWAXSXSVSPV 88
           NPY EPR I PL+   +     F ++G P     + SP+
Sbjct: 395 NPYPEPRSISPLMNTRSFDVEDFMVSGSPLPQESNASPL 433


>AE013599-90|AAF57325.2|  683|Drosophila melanogaster CG1344-PA
           protein.
          Length = 683

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -1

Query: 198 NPYLEPRPIRPLVCLNA--NTSFSMTGKPWAXSXSVSPV 88
           NPY EPR I PL+   +     F ++G P     + SP+
Sbjct: 437 NPYPEPRSISPLMNTRSFDVEDFMVSGSPLPQESNASPL 475


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,271,185
Number of Sequences: 53049
Number of extensions: 238218
Number of successful extensions: 638
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 610819518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)