Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_A04
         (142 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34897-1|CAA84380.1|  487|Homo sapiens Human histamine H1 recept...    27   8.1  
X76786-1|CAA54182.1|  487|Homo sapiens histamine H1 receptor pro...    27   8.1  
D28481-1|BAA05840.1|  487|Homo sapiens histamine H1 receptor pro...    27   8.1  
D14436-1|BAA03319.1|  487|Homo sapiens histamine H1 receptor pro...    27   8.1  
BC060802-1|AAH60802.1|  487|Homo sapiens histamine receptor H1 p...    27   8.1  
AY136743-1|AAN01269.1|  487|Homo sapiens histamine receptor H1 p...    27   8.1  
AF026261-1|AAB95156.1|  487|Homo sapiens histamine H1 receptor p...    27   8.1  
AB041380-1|BAA94465.1|  487|Homo sapiens histamine H1 receptor p...    27   8.1  

>Z34897-1|CAA84380.1|  487|Homo sapiens Human histamine H1 receptor
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = +1

Query: 16  IVSVICNI-VTLNIIILFYSIRSKRP-HTNCNTHISAYFSIIDL 141
           ++S IC + V LN+++L Y++RS+R  HT  N +I +  S+ DL
Sbjct: 33  VLSTICLVTVGLNLLVL-YAVRSERKLHTVGNLYIVS-LSVADL 74


>X76786-1|CAA54182.1|  487|Homo sapiens histamine H1 receptor
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = +1

Query: 16  IVSVICNI-VTLNIIILFYSIRSKRP-HTNCNTHISAYFSIIDL 141
           ++S IC + V LN+++L Y++RS+R  HT  N +I +  S+ DL
Sbjct: 33  VLSTICLVTVGLNLLVL-YAVRSERKLHTVGNLYIVS-LSVADL 74


>D28481-1|BAA05840.1|  487|Homo sapiens histamine H1 receptor
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = +1

Query: 16  IVSVICNI-VTLNIIILFYSIRSKRP-HTNCNTHISAYFSIIDL 141
           ++S IC + V LN+++L Y++RS+R  HT  N +I +  S+ DL
Sbjct: 33  VLSTICLVTVGLNLLVL-YAVRSERKLHTVGNLYIVS-LSVADL 74


>D14436-1|BAA03319.1|  487|Homo sapiens histamine H1 receptor
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = +1

Query: 16  IVSVICNI-VTLNIIILFYSIRSKRP-HTNCNTHISAYFSIIDL 141
           ++S IC + V LN+++L Y++RS+R  HT  N +I +  S+ DL
Sbjct: 33  VLSTICLVTVGLNLLVL-YAVRSERKLHTVGNLYIVS-LSVADL 74


>BC060802-1|AAH60802.1|  487|Homo sapiens histamine receptor H1
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = +1

Query: 16  IVSVICNI-VTLNIIILFYSIRSKRP-HTNCNTHISAYFSIIDL 141
           ++S IC + V LN+++L Y++RS+R  HT  N +I +  S+ DL
Sbjct: 33  VLSTICLVTVGLNLLVL-YAVRSERKLHTVGNLYIVS-LSVADL 74


>AY136743-1|AAN01269.1|  487|Homo sapiens histamine receptor H1
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = +1

Query: 16  IVSVICNI-VTLNIIILFYSIRSKRP-HTNCNTHISAYFSIIDL 141
           ++S IC + V LN+++L Y++RS+R  HT  N +I +  S+ DL
Sbjct: 33  VLSTICLVTVGLNLLVL-YAVRSERKLHTVGNLYIVS-LSVADL 74


>AF026261-1|AAB95156.1|  487|Homo sapiens histamine H1 receptor
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = +1

Query: 16  IVSVICNI-VTLNIIILFYSIRSKRP-HTNCNTHISAYFSIIDL 141
           ++S IC + V LN+++L Y++RS+R  HT  N +I +  S+ DL
Sbjct: 33  VLSTICLVTVGLNLLVL-YAVRSERKLHTVGNLYIVS-LSVADL 74


>AB041380-1|BAA94465.1|  487|Homo sapiens histamine H1 receptor
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = +1

Query: 16  IVSVICNI-VTLNIIILFYSIRSKRP-HTNCNTHISAYFSIIDL 141
           ++S IC + V LN+++L Y++RS+R  HT  N +I +  S+ DL
Sbjct: 33  VLSTICLVTVGLNLLVL-YAVRSERKLHTVGNLYIVS-LSVADL 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,752,545
Number of Sequences: 237096
Number of extensions: 192927
Number of successful extensions: 227
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 76,859,062
effective HSP length: 27
effective length of database: 70,457,470
effective search space used: 1338691930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)