Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_A04
         (142 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132148-1|AAD34736.1|  653|Drosophila melanogaster unknown prot...    29   0.67 
AE014297-3634|AAF56342.1|  653|Drosophila melanogaster CG5808-PA...    29   0.67 
AY061295-1|AAL28843.1|  517|Drosophila melanogaster LD20635p pro...    27   4.7  
AE013599-2245|AAF58019.1|  517|Drosophila melanogaster CG7747-PA...    27   4.7  

>AF132148-1|AAD34736.1|  653|Drosophila melanogaster unknown
          protein.
          Length = 653

 Score = 29.5 bits (63), Expect = 0.67
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 6  RVLNCVSYM*HCHTEYYNFILFH*VK 83
          R + C++++  C  +YYNF LFH V+
Sbjct: 21 RPIACLNFLKLCRLKYYNFNLFHTVQ 46


>AE014297-3634|AAF56342.1|  653|Drosophila melanogaster CG5808-PA
          protein.
          Length = 653

 Score = 29.5 bits (63), Expect = 0.67
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 6  RVLNCVSYM*HCHTEYYNFILFH*VK 83
          R + C++++  C  +YYNF LFH V+
Sbjct: 21 RPIACLNFLKLCRLKYYNFNLFHTVQ 46


>AY061295-1|AAL28843.1|  517|Drosophila melanogaster LD20635p
           protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 18  CVSYM*HCHTEYYNFILFH 74
           C +++ HC   YYN ++FH
Sbjct: 304 CDNFIKHCANGYYNNVMFH 322


>AE013599-2245|AAF58019.1|  517|Drosophila melanogaster CG7747-PA
           protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 18  CVSYM*HCHTEYYNFILFH 74
           C +++ HC   YYN ++FH
Sbjct: 304 CDNFIKHCANGYYNNVMFH 322


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,375,613
Number of Sequences: 53049
Number of extensions: 63937
Number of successful extensions: 77
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 24,988,368
effective HSP length: 27
effective length of database: 23,556,045
effective search space used: 447564855
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)