Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_A04
(142 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 24 0.19
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 24 0.19
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 1.0
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 19 4.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 19 4.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 19 4.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 19 4.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 19 4.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 19 4.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 19 4.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 19 4.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 19 4.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 19 4.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 5.4
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 19 5.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 19 7.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 19 7.2
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 19 7.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 19 7.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 19 7.2
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 19 7.2
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 18 9.5
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 18 9.5
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.8 bits (49), Expect = 0.19
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 95 VWGRFDLME*NKIIIFSVTMLHITDT 18
VW RF++ E + SV ++H DT
Sbjct: 127 VWARFNVNEQMYLYALSVAVIHRPDT 152
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.8 bits (49), Expect = 0.19
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 95 VWGRFDLME*NKIIIFSVTMLHITDT 18
VW RF++ E + SV ++H DT
Sbjct: 127 VWARFNVNEQMYLYALSVAVIHRPDT 152
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 1.0
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HNLE 10
N NYN C + YN N+E
Sbjct: 341 NNYNNNYNNNCKKLYYNIINIE 362
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 86 NSLSNNYNYNNNYNNYNKHN 105
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 86 NSLSNNYNYNNNYNNYNKHN 105
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 86 NSLSNNYNYNNNYNNYNKHN 105
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 86 NSLSNNYNYNNNYNNYNKHN 105
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 86 NSLSNNYNYNNNYNNYNKHN 105
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 86 NSLSNNYNYNNNYNNYNKHN 105
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 86 NSLSNNYNYNNNYNNYNKHN 105
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 86 NSLSNNYNYNNNYNNYNKHN 105
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 319 NSLSNNYNYNNNYNNYNKHN 338
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 319 NSLSNNYNYNNNYNNYNKHN 338
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.0 bits (37), Expect = 5.4
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +1
Query: 22 SVICNIVTLNIIILFYSIRSKRPHTNCN 105
+++ +V L III+ + +R CN
Sbjct: 537 AIVAVVVLLVIIIIMTVLILRRASDECN 564
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 19.0 bits (37), Expect = 5.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 59 FYFIPLGQNDP 91
F +PLG +DP
Sbjct: 320 FLMLPLGADDP 330
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 75 NGIK*NYNIQCDNVTYN*HN 16
N + NYN + YN HN
Sbjct: 86 NPLSNNYNYNNNYNNYNKHN 105
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 60 NYNIQCDNVTYN*HN 16
NYN +N YN +N
Sbjct: 321 NYNYNNNNYKYNYNN 335
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 31 CNIVTLNIIILF 66
CNI TL + +LF
Sbjct: 5 CNIWTLAVNVLF 16
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 31 CNIVTLNIIILF 66
CNI TL + +LF
Sbjct: 5 CNIWTLAVNVLF 16
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 31 CNIVTLNIIILF 66
CNI TL + +LF
Sbjct: 5 CNIWTLAVNVLF 16
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/19 (36%), Positives = 7/19 (36%)
Frame = -2
Query: 57 YNIQCDNVTYN*HNLEPSC 1
YN V Y N P C
Sbjct: 138 YNFDYPQVPYTVKNFHPRC 156
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 37 IVTLNIIILFYS 72
++ L IILFYS
Sbjct: 230 VIPLIFIILFYS 241
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 37 IVTLNIIILFYS 72
++ L IILFYS
Sbjct: 230 VIPLIFIILFYS 241
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,217
Number of Sequences: 438
Number of extensions: 488
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 27
effective length of database: 134,517
effective search space used: 2555823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -